RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.56e-7■■□□□ 12.2
SREBF1-203ENST00000395751 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
SREBF1-203ENST00000395751 NSL1Q96IY1 281 aa18.18■□□□□ 0.5
SREBF1-203ENST00000395751 THTPAQ9BU02 230 aa18.18■□□□□ 0.5
SREBF1-203ENST00000395751 PKD2L1Q9P0L9 805 aa18.18■□□□□ 0.5
SREBF1-203ENST00000395751 ENO1P06733 434 aaKnown RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 CASP10Q92851 521 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 LACRTQ9GZZ8 138 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 HAO1Q9UJM8 370 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 TRAPPC3O43617 180 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 STRNO43815 780 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 STAM2O75886 525 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 CDC25CP30307 473 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 BARGINQ6ZT62 677 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 DNAJC7Q99615 494 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 S100BP04271 92 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 PHKA1P46020 1223 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 NAB2Q15742 525 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 ASCC2Q9H1I8 757 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 RXFP1Q9HBX9 757 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 CTDNEP1O95476 244 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 GAP43P17677 238 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 ATP2C1P98194 919 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 KLHL23Q8NBE8 558 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 PROCA1Q8NCQ7 364 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-203ENST00000395751 AGAP11Q8TF27 550 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 DNAJC12Q9UKB3 198 aa18.17■□□□□ 0.5
SREBF1-203ENST00000395751 LPXNO60711 386 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 KRT1P04264 644 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 KITP10721 976 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 RCAN1P53805 252 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 MRPS15P82914 257 aaKnown RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 TMEM259Q4ZIN3 620 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 DDHD1Q8NEL9 900 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 MRPL40Q9NQ50 206 aaKnown RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 RNF103-CHMP3A0A140T963 221 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 KRT38O76015 456 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 CYB5R4Q7L1T6 521 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 JAMLQ86YT9 394 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 TTLL1O95922 423 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 BTKQ06187 659 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 TBX2Q13207 712 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 ODR4Q5SWX8 454 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 NMD3Q96D46 503 aaKnown RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 K7ENM7 598 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 ALDH5A1P51649 535 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 USP11P51784 963 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 HDAC4P56524 1084 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 EGFL6Q8IUX8 553 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 KCNB2Q92953 911 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 ZNF229Q9UJW7 825 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 DUSP10Q9Y6W6 482 aa18.16■□□□□ 0.5
SREBF1-203ENST00000395751 PDS5AQ29RF7 1337 aaKnown RBP18.16■□□□□ 0.5
SREBF1-203ENST00000395751 ATP6V1B1P15313 513 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 RFC5P40937 340 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 WASHC2DQ5SRD0 308 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 USP49Q70CQ1 688 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 ZNF354CQ86Y25 554 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 TSSK1BQ9BXA7 367 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 ING2Q9H160 280 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 WNT8AQ9H1J5 351 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 CCDC134Q9H6E4 229 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 DDX28Q9NUL7 540 aaKnown RBP18.15■□□□□ 0.5
SREBF1-203ENST00000395751 MTO1Q9Y2Z2 717 aaKnown RBP18.15■□□□□ 0.5
SREBF1-203ENST00000395751 TRPM1Q7Z4N2 1603 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PLEKHG3A1L390 1219 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PDE8BO95263 885 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 GLI1P08151 1106 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PCGF5Q86SE9 256 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 CADPS2Q86UW7 1296 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 SGMS1Q86VZ5 419 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 DDI1Q8WTU0 396 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 GID8Q9NWU2 228 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 MID2Q9UJV3 735 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PHF2O75151 1096 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PI16Q6UXB8 463 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 MYLK4Q86YV6 388 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-203ENST00000395751 TBC1D10CQ8IV04 446 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 BTBD6Q96KE9 485 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 KIFC3Q9BVG8 833 aa18.15■□□□□ 0.5
SREBF1-203ENST00000395751 CELF4Q9BZC1 486 aaKnown RBP18.15■□□□□ 0.5
SREBF1-203ENST00000395751 PFASO15067 1338 aa18.14■□□□□ 0.5
SREBF1-203ENST00000395751 ATXN2Q99700 1313 aaKnown RBP18.14■□□□□ 0.5
SREBF1-203ENST00000395751 DEAF1O75398 565 aaPredicted RBP18.14■□□□□ 0.5
SREBF1-203ENST00000395751 CALB2P22676 271 aa18.14■□□□□ 0.5
SREBF1-203ENST00000395751 KLRC1P26715 233 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms