RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZNF292O60281 2723 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 IGLV3-22A0A075B6J6 115 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 FAM86B1E9PN63 330 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 FAM86B2P0C5J1 330 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 MTHFRP42898 656 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 CLK2P49760 499 aaKnown RBP17.98■□□□□ 0.47
SNCA-205ENST00000394991 RARS2Q5T160 578 aaKnown RBP17.98■□□□□ 0.47
SNCA-205ENST00000394991 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 MIS18BP1Q6P0N0 1132 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 ZDHHC14Q8IZN3 488 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 ABI1Q8IZP0 508 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 METTL13Q8N6R0 699 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 LINC01465Q8N7H1 131 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 BBXQ8WY36 941 aaPredicted RBP17.98■□□□□ 0.47
SNCA-205ENST00000394991 ADAMTS10Q9H324 1103 aa17.98■□□□□ 0.47
SNCA-205ENST00000394991 EP300Q09472 2414 aaPredicted RBP17.98■□□□□ 0.47
SNCA-205ENST00000394991 NT5C1B-RDH14C9J2C7 533 aa17.97■□□□□ 0.47
SNCA-205ENST00000394991 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 FUT2Q10981 343 aa17.97■□□□□ 0.47
SNCA-205ENST00000394991 CWF19L1Q69YN2 538 aaKnown RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 KIAA1841Q6NSI8 718 aa17.97■□□□□ 0.47
SNCA-205ENST00000394991 TRMT1LQ7Z2T5 733 aaKnown RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 TDRD5Q8NAT2 981 aaKnown RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 RNF169Q8NCN4 708 aa17.97■□□□□ 0.47
SNCA-205ENST00000394991 ZNF668Q96K58 619 aaPredicted RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 LIMD1Q9UGP4 676 aa17.97■□□□□ 0.47
SNCA-205ENST00000394991 MAFBQ9Y5Q3 323 aaPredicted RBP17.97■□□□□ 0.47
SNCA-205ENST00000394991 SLC27A2O14975 620 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 ZNF76P36508 570 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 METAP2P50579 478 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNCA-205ENST00000394991 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 TMEM173Q86WV6 379 aaPredicted RBP17.96■□□□□ 0.47
SNCA-205ENST00000394991 TEX2Q8IWB9 1127 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 CKAP2LQ8IYA6 745 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 LRRC71Q8N4P6 559 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 HELQQ8TDG4 1101 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 CRYGNQ8WXF5 182 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 AUTS2Q8WXX7 1259 aa17.96■□□□□ 0.47
SNCA-205ENST00000394991 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
SNCA-205ENST00000394991 WDR87Q6ZQQ6 2873 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 SMCO2A6NFE2 343 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 IPO5O00410 1097 aaKnown RBP17.95■□□□□ 0.46
SNCA-205ENST00000394991 ADAMTS3O15072 1205 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 EPCAMP16422 314 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
SNCA-205ENST00000394991 FGFR4P22455 802 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 CA8P35219 290 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 CLCN5P51795 746 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 NKD2Q969F2 451 aaPredicted RBP17.95■□□□□ 0.46
SNCA-205ENST00000394991 ZBP1Q9H171 429 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 AKT3Q9Y243 479 aa17.95■□□□□ 0.46
SNCA-205ENST00000394991 CXCL14O95715 111 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 EIF4BP23588 611 aaKnown RBP17.94■□□□□ 0.46
SNCA-205ENST00000394991 BCAR1P56945 870 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 ZNF746Q6NUN9 644 aaPredicted RBP17.94■□□□□ 0.46
SNCA-205ENST00000394991 EFCAB12Q6NXP0 572 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 SLC22A17Q8WUG5 538 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 MFSD1Q9H3U5 465 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 DZANK1Q9NVP4 752 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 GABBR1Q9UBS5 961 aa17.94■□□□□ 0.46
SNCA-205ENST00000394991 DBR1Q9UK59 544 aaKnown RBP17.94■□□□□ 0.46
SNCA-205ENST00000394991 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
SNCA-205ENST00000394991 A0A0U1RQF3 1178 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.93■□□□□ 0.46
SNCA-205ENST00000394991 MAGEB2O15479 319 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 PI15O43692 258 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 EOMESO95936 686 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 CYP3A4P08684 503 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 GPC3P51654 580 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 CREB3L3Q68CJ9 461 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 ADSSL1Q8N142 457 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 VPS52Q8N1B4 723 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 FLCNQ8NFG4 579 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 BCL7CQ8WUZ0 217 aaPredicted RBP17.93■□□□□ 0.46
SNCA-205ENST00000394991 TMEM169Q96HH4 297 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 MAP7D2Q96T17 732 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 ZNF577Q9BSK1 485 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 RBM28Q9NW13 759 aaKnown RBP17.93■□□□□ 0.46
SNCA-205ENST00000394991 CEP131Q9UPN4 1083 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 DOCK8Q8NF50 2099 aa17.93■□□□□ 0.46
SNCA-205ENST00000394991 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 ZNF862O60290 1169 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 DARSP14868 501 aaKnown RBP17.92■□□□□ 0.46
SNCA-205ENST00000394991 NPR3P17342 541 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 RTN1Q16799 776 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 ATAT1Q5SQI0 421 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 ERMP1Q7Z2K6 904 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 PLCD3Q8N3E9 789 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
SNCA-205ENST00000394991 MRPL9Q9BYD2 267 aaKnown RBP17.92■□□□□ 0.46
SNCA-205ENST00000394991 CYP26B1Q9NR63 512 aa17.92■□□□□ 0.46
SNCA-205ENST00000394991 TBC1D22BQ9NU19 505 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms