RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 FAM207AQ9NSI2 230 aaPredicted RBP16.42■□□□□ 0.22
CCT4-201ENST00000394440 DGAT1O75907 488 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 ARIH2O95376 493 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 HAUS6Q7Z4H7 955 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 SLC17A8Q8NDX2 589 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 GPRC5AQ8NFJ5 357 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 BAP1Q92560 729 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 SLC35C1Q96A29 364 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 PCYT2Q99447 389 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 TMEM206Q9H813 350 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 MMRN2Q9H8L6 949 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 ZNF302Q9NR11 478 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
CCT4-201ENST00000394440 SEPT9Q9UHD8 586 aaPredicted RBP16.42■□□□□ 0.22
CCT4-201ENST00000394440 NOL4O94818 638 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 PEX3P56589 373 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 CDK17Q00537 523 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 FAM102BQ5T8I3 360 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 C12orf56Q8IXR9 622 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 KIFAP3Q92845 792 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 C17orf75Q9HAS0 396 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
CCT4-201ENST00000394440 PLAGL2Q9UPG8 496 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
CCT4-201ENST00000394440 PSMC2P35998 433 aaKnown RBP16.41■□□□□ 0.22
CCT4-201ENST00000394440 RTP1P59025 263 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 ETF1P62495 437 aaKnown RBP16.41■□□□□ 0.22
CCT4-201ENST00000394440 DPY19L2P1Q6NXN4 242 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 EEPD1Q7L9B9 569 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 SPIRE2Q8WWL2 714 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
CCT4-201ENST00000394440 PAXBP1Q9Y5B6 917 aa16.41■□□□□ 0.22
CCT4-201ENST00000394440 GGPS1O95749 300 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 AFPP02771 609 aaKnown RBP16.4■□□□□ 0.22
CCT4-201ENST00000394440 OATP04181 439 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 GCLCP48506 637 aaPredicted RBP16.4■□□□□ 0.22
CCT4-201ENST00000394440 CCNA1P78396 465 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
CCT4-201ENST00000394440 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
CCT4-201ENST00000394440 AFAP1L1Q8TED9 768 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
CCT4-201ENST00000394440 SLC16A4O15374 487 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 NPTX2P47972 431 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 WDR78Q5VTH9 848 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 CST9Q5W186 159 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 FAM186BQ8IYM0 893 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 MYRIPQ8NFW9 859 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 HVCN1Q96D96 273 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 CEP72Q9P209 647 aa16.4■□□□□ 0.22
CCT4-201ENST00000394440 NDUFA10O95299 355 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 SYCP3Q8IZU3 236 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 ANKRD13CQ8N6S4 541 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 EPN1Q9Y6I3 576 aaPredicted RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 ZNF236Q9UL36 1845 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 FANCGO15287 622 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 SOX10P56693 466 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 DMP1Q13316 513 aaPredicted RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 KIF18AQ8NI77 898 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 PTPN18Q99952 460 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 GANQ9H2C0 597 aa16.39■□□□□ 0.21
CCT4-201ENST00000394440 REXO2Q9Y3B8 237 aaKnown RBP16.39■□□□□ 0.21
CCT4-201ENST00000394440 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 MTERF2Q49AM1 385 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 FBXO16Q8IX29 292 aaPredicted RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 KCNN1Q92952 543 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 DHX33Q9H6R0 707 aaKnown RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 PLCB1Q9NQ66 1216 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 A0A0U1RQJ8 604 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
CCT4-201ENST00000394440 ASB14A6NK59 587 aa16.38■□□□□ 0.21
CCT4-201ENST00000394440 LRRC53A6NM62 1247 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms