RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TPM1P09493 284 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 CETPP11597 493 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 NPTX2P47972 431 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 DRP2Q13474 957 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 MIS18BP1Q6P0N0 1132 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 GJB7Q6PEY0 223 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 GPRC5AQ8NFJ5 357 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 LSM14BQ9BX40 385 aaKnown RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.42■□□□□ 0.22
MKS1-202ENST00000393119 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 KCND2Q9NZV8 630 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ARMCX3Q9UH62 379 aaPredicted RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 EIF3DO15371 548 aaKnown RBP eCLIP16.42■□□□□ 0.22
MKS1-202ENST00000393119 ADORA2AP29274 412 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 TCF7P36402 384 aaPredicted RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 HUNKP57058 714 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 DLG4P78352 724 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ENOX2Q16206 610 aaKnown RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 RRAGAQ7L523 313 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 GBP3Q9H0R5 595 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 KCND1Q9NSA2 647 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 FAM53CQ9NYF3 392 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 LARSQ9P2J5 1176 aaKnown RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
MKS1-202ENST00000393119 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 LRRC53A6NM62 1247 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 STAM2O75886 525 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 GTF2A2P52657 109 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 BORCS6Q96GS4 357 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 ZNF668Q96K58 619 aaPredicted RBP16.41■□□□□ 0.22
MKS1-202ENST00000393119 WDR24Q96S15 920 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 MLXIPQ9HAP2 919 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 CPA4Q9UI42 421 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 ATG7O95352 703 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
MKS1-202ENST00000393119 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 NAA30Q147X3 362 aaPredicted RBP16.41■□□□□ 0.22
MKS1-202ENST00000393119 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 PPP1R13LQ8WUF5 828 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 SLC35C1Q96A29 364 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 SEL1LQ9UBV2 794 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
MKS1-202ENST00000393119 MAFBQ9Y5Q3 323 aaPredicted RBP16.41■□□□□ 0.22
MKS1-202ENST00000393119 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 PNMA6AP0CW24 399 aaPredicted RBP16.4■□□□□ 0.22
MKS1-202ENST00000393119 FECHP22830 423 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
MKS1-202ENST00000393119 FAM186BQ8IYM0 893 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 BAP1Q92560 729 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 PDLIM7Q9NR12 457 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 MCM3APO60318 1980 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 KCNJ6P48051 423 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 ARID5AQ03989 594 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 TRIM14Q14142 442 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 DPY19L2P1Q6NXN4 242 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 CYP26C1Q6V0L0 522 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 OTUD6AQ7L8S5 288 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 RDM1Q8NG50 284 aa16.4■□□□□ 0.22
MKS1-202ENST00000393119 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.39■□□□□ 0.21
MKS1-202ENST00000393119 DENND3A2RUS2 1198 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
MKS1-202ENST00000393119 ADSSP30520 456 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 ZBED6P86452 979 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 ARMCX2Q7L311 632 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 SAAL1Q96ER3 474 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 POLR3FQ9H1D9 316 aaPredicted RBP16.39■□□□□ 0.21
MKS1-202ENST00000393119 MROH8Q9H579 483 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 ARHGAP20Q9P2F6 1191 aa16.39■□□□□ 0.21
MKS1-202ENST00000393119 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
MKS1-202ENST00000393119 EXOC3O60645 756 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 OATP04181 439 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
MKS1-202ENST00000393119 STAT5BP51692 787 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 TAS1R3Q7RTX0 852 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 TMTC1Q8IUR5 882 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
MKS1-202ENST00000393119 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
MKS1-202ENST00000393119 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
MKS1-202ENST00000393119 IGKV6D-21A0A0A0MT36 114 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms