RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 SLKQ9H2G2 1235 aaPredicted RBP18.68■□□□□ 0.58
PTPRK-208ENST00000392449 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 TYW1Q9NV66 732 aaKnown RBP18.68■□□□□ 0.58
PTPRK-208ENST00000392449 EML1O00423 815 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 TMOD1P28289 359 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 CEP89Q96ST8 783 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 TMEM161AQ9NX61 479 aa18.67■□□□□ 0.58
PTPRK-208ENST00000392449 FAM205CA6NFA0 338 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 PFKFB2O60825 505 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 LARGE1O95461 756 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 EIF4BP23588 611 aaKnown RBP18.66■□□□□ 0.58
PTPRK-208ENST00000392449 PBX3P40426 434 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 AK2P54819 239 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 FAM189BP81408 668 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 EARS2Q5JPH6 523 aaKnown RBP18.66■□□□□ 0.58
PTPRK-208ENST00000392449 PLA2G4FQ68DD2 849 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 KRT25Q7Z3Z0 450 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 NLRP7Q8WX94 980 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 LRFN3Q9BTN0 628 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 CWH43Q9H720 699 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 ATP6V0A4Q9HBG4 840 aa18.66■□□□□ 0.58
PTPRK-208ENST00000392449 DARSP14868 501 aaKnown RBP18.65■□□□□ 0.58
PTPRK-208ENST00000392449 NRIP1P48552 1158 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 RBM10P98175 930 aaKnown RBP18.65■□□□□ 0.58
PTPRK-208ENST00000392449 PUS10Q3MIT2 529 aaKnown RBP18.65■□□□□ 0.58
PTPRK-208ENST00000392449 NAALADL2Q58DX5 795 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 GALNT17Q6IS24 598 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 LRRC55Q6ZSA7 311 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 PIK3AP1Q6ZUJ8 805 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 COLGALT1Q8NBJ5 622 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 VAV3Q9UKW4 847 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 STK36Q9NRP7 1315 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 CCDC194A0A1B0GVG4 234 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 CDKL5O76039 1030 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 FGF18O76093 207 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 ZP2Q05996 745 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 ADAM15Q13444 863 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 XKR3Q5GH77 459 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 MOXD1Q6UVY6 613 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 ANO5Q75V66 913 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 THNSL1Q8IYQ7 743 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 RDM1Q8NG50 284 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 CASD1Q96PB1 797 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 NIFKQ9BYG3 293 aaKnown RBP18.65■□□□□ 0.58
PTPRK-208ENST00000392449 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
PTPRK-208ENST00000392449 PCDHB12Q9Y5F1 795 aa18.65■□□□□ 0.58
PTPRK-208ENST00000392449 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 PER2O15055 1255 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 MBTPS2O43462 519 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 NCK2O43639 380 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 GLP2RO95838 553 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 NDUFV1P49821 464 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 ERVFC1P60507 584 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 ECHDC2Q86YB7 292 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 KSR1Q8IVT5 923 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
PTPRK-208ENST00000392449 ELAC1Q9H777 363 aaKnown RBP18.64■□□□□ 0.57
PTPRK-208ENST00000392449 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 CLEC1BQ9P126 229 aa18.64■□□□□ 0.57
PTPRK-208ENST00000392449 ORC3Q9UBD5 711 aaPredicted RBP18.64■□□□□ 0.57
PTPRK-208ENST00000392449 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
PTPRK-208ENST00000392449 A0A087WZ62 844 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 CCNT1O60563 726 aaKnown RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 FDPSP14324 419 aaKnown RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 ATF7P17544 494 aaPredicted RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 FOSBP53539 338 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 NPEPPSP55786 919 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 NR5A1Q13285 461 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 TMEM31Q5JXX7 168 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 CLLU1OSQ5K130 101 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 HAS1Q92839 578 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 FDXACB1Q9BRP7 624 aaPredicted RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 BMP2KQ9NSY1 1161 aaPredicted RBP18.63■□□□□ 0.57
PTPRK-208ENST00000392449 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 CD207Q9UJ71 328 aa18.63■□□□□ 0.57
PTPRK-208ENST00000392449 IGKV6-21A0A0C4DH24 114 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 PPP2R5CQ13362 524 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 SMAD2Q15796 467 aaKnown RBP18.62■□□□□ 0.57
PTPRK-208ENST00000392449 ME3Q16798 604 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 LONRF3Q496Y0 759 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 RHPN2Q8IUC4 686 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 FAM177A1Q8N128 213 aaPredicted RBP18.62■□□□□ 0.57
PTPRK-208ENST00000392449 EFHBQ8N7U6 833 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 VN1R2Q8NFZ6 395 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 MSLNLQ96KJ4 702 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 TMEM117Q9H0C3 514 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 TLR9Q9NR96 1032 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 AAASQ9NRG9 546 aa18.62■□□□□ 0.57
PTPRK-208ENST00000392449 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
PTPRK-208ENST00000392449 PSMC5P62195 406 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms