RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 ZNF496Q96IT1 587 aaPredicted RBP4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 PITHD1Q9GZP4 211 aaPredicted RBP4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 MTG2Q9H4K7 406 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 JADE2Q9NQC1 790 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 KCNG1Q9UIX4 513 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 MAGEL2Q9UJ55 1249 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 FAM184BQ9ULE4 1060 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 SYNPO2Q9UMS6 1093 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 SLC4A7Q9Y6M7 1214 aa4.27□□□□□ -1.73
RNU6-550P-201ENST00000391057 ZNF536O15090 1300 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 SHROOM4Q9ULL8 1493 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 LOC105371045A0A1W2PR82 267 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 BTBD11A6QL63 1104 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 LAMTOR5O43504 91 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 PRICKLE3O43900 615 aaPredicted RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 OPHN1O60890 802 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 H2AFYO75367 372 aaKnown RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 PCDH8O95206 1070 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 POU3F3P20264 500 aaPredicted RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 MRE11P49959 708 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 CTSWP56202 376 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 SESN2P58004 480 aaPredicted RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 PPP2CBP62714 309 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 PPP2CAP67775 309 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 FAPQ12884 760 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 ZNF827Q17R98 1081 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 AGBL4Q5VU57 503 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 KLHDC10Q6PID8 442 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 UNQ6494/PRO21346Q6UXR6 183 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 DDX42Q86XP3 938 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 BCL6BQ8N143 479 aaPredicted RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 HIST1H2AHQ96KK5 128 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 HIST1H2AJQ99878 128 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 NOL10Q9BSC4 688 aaKnown RBP4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 WNT8AQ9H1J5 351 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 DENND2AQ9ULE3 1009 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 ATP8A1Q9Y2Q0 1164 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 VWA7Q9Y334 891 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 NR2E1Q9Y466 385 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 COL4A3BPQ9Y5P4 624 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 PPP2R3BQ9Y5P8 575 aa4.26□□□□□ -1.73
RNU6-550P-201ENST00000391057 A0A0A6YYJ9 748 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 PRSS38A1L453 326 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 ARHGAP6O43182 974 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 PRKD3O94806 890 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 CNOT4O95628 575 aaKnown RBP4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 PLATP00750 562 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 PFKMP08237 780 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 CLEC2LP0C7M8 214 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 EPHB4P54760 987 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 MANFP55145 182 aaKnown RBP4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 ANTXR2P58335 489 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 AMPD3Q01432 767 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 CCDC62Q6P9F0 684 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 USP30Q70CQ3 517 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 CDYL2Q8N8U2 506 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 COG1Q8WTW3 980 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 GFM2Q969S9 779 aaKnown RBP4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 C20orf173Q96LM9 149 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 WDR92Q96MX6 357 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 ACAP3Q96P50 834 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 ANO3Q9BYT9 981 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 HAPLN2Q9GZV7 340 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 OR10A2Q9H208 303 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 TOPORSQ9NS56 1045 aaPredicted RBP4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 DNAI1Q9UI46 699 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 PCDHB6Q9Y5E3 794 aa4.25□□□□□ -1.73
RNU6-550P-201ENST00000391057 NRP2O60462 931 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 CDK11BP21127 795 aaKnown RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 IBSPP21815 317 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 XPAP23025 273 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 RAC3P60763 192 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 PPARAQ07869 468 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 ADAM15Q13444 863 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 NFYCQ13952 458 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 PTPROQ16827 1216 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 RNF151Q2KHN1 245 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 TBC1D10BQ4KMP7 808 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 SLFN13Q68D06 897 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 NECAB2Q7Z6G3 386 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 CXorf38Q8TB03 319 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 LPPQ93052 612 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 NKD2Q969F2 451 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 RELTQ969Z4 430 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 SLC7A6OSQ96CW6 309 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 NEIL1Q96FI4 390 aaPredicted RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 AHCYL2Q96HN2 611 aaKnown RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 LMF1Q96S06 567 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 BDH2Q9BUT1 245 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 SEC61A2Q9H9S3 476 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 PCDH12Q9NPG4 1184 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 SLC5A4Q9NY91 659 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 PUF60Q9UHX1 559 aaKnown RBP4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 USP18Q9UMW8 372 aa4.24□□□□□ -1.73
RNU6-550P-201ENST00000391057 NPEPPSL1A6NEC2 478 aa4.23□□□□□ -1.73
RNU6-550P-201ENST00000391057 GOLGA8AA7E2F4 631 aa4.23□□□□□ -1.73
RNU6-550P-201ENST00000391057 GOLGA8BA8MQT2 603 aa4.23□□□□□ -1.73
RNU6-550P-201ENST00000391057 DAPK3O43293 454 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms