RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SUPT20HQ8NEM7 779 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 PCDH19Q8TAB3 1148 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 CPT1CQ8TCG5 803 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 CALML6Q8TD86 181 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 THAP3Q8WTV1 239 aaPredicted RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 ASB15Q8WXK1 588 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 OSBP2Q969R2 916 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 GFM2Q969S9 779 aaKnown RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 LENG9Q96B70 501 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 ARL8AQ96BM9 186 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 NBPF4Q96M43 638 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 GBP4Q96PP9 640 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 GPHA2Q96T91 129 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 TCF25Q9BQ70 676 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 AARSD1Q9BTE6 412 aaKnown RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 WDR11Q9BZH6 1224 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 EPN3Q9H201 632 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 EPC1Q9H2F5 836 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 TOR3AQ9H497 397 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 SAE1Q9UBE0 346 aaPredicted RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 TESQ9UGI8 421 aaKnown RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 TRPS1Q9UHF7 1281 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 DENND2AQ9ULE3 1009 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 CBLCQ9ULV8 474 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 FZD1Q9UP38 647 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 SORCS3Q9UPU3 1222 aa0.97□□□□□ -2.25
SNORD28-201ENST00000384706 CTDP1Q9Y5B0 961 aaPredicted RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 POLR2AP24928 1970 aaKnown RBP0.97□□□□□ -2.25
SNORD28-201ENST00000384706 ARHGEF17Q96PE2 2063 aaPredicted RBP0.96□□□□□ -2.25
SNORD28-201ENST00000384706 A0A0A6YYK5 440 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 TRAV20A0A0B4J274 112 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CENPVL1A0A0U1RR11 272 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CCDC66A2RUB6 948 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 KLRG2A4D1S0 409 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 GRID2IPA4D2P6 1211 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 IQCA1LA6NCM1 817 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 AQP7O14520 342 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 FOXP2O15409 715 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 DAPK3O43293 454 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 LPXNO60711 386 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CLASP2O75122 1294 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 LAG3P18627 525 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 GNAT2P19087 354 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 NR4A1P22736 598 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 APEX1P27695 318 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ZEB1P37275 1124 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PLA2G5P39877 138 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CLK3P49761 638 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 RABGGTBP53611 331 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PTTG1IPP53801 180 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 NPEPPSP55786 919 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SESN2P58004 480 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ANTXR2P58335 489 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 TAP1Q03518 808 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 TCIRG1Q13488 830 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 TMEM132BQ14DG7 1078 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ERCC6LQ2NKX8 1250 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PLEKHG4Q58EX7 1191 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 FAM47CQ5HY64 1035 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 FIGNQ5HY92 759 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 C1QL3Q5VWW1 255 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 MFSD5Q6N075 450 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 LRRC55Q6ZSA7 311 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 RHOUQ7L0Q8 258 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CXorf67Q86X51 503 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PRIMA1Q86XR5 153 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 BCL6BQ8N143 479 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CISD2Q8N5K1 135 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CELF2-AS1Q8N7Q2 184 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PLA2G15Q8NCC3 412 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ST8SIA2Q92186 375 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 LPPQ93052 612 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CAVIN3Q969G5 261 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SLC7A6OSQ96CW6 309 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SGSM3Q96HU1 749 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF512Q96ME7 567 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CDC6Q99741 560 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 BUD13Q9BRD0 619 aaKnown RBP eCLIP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CPPED1Q9BRF8 314 aaPredicted RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SPATA5L1Q9BVQ7 753 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SLC29A3Q9BZD2 475 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 TGIF2Q9GZN2 237 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 R3HDMLQ9H3Y0 253 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SERHL2Q9H4I8 314 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF768Q9H5H4 540 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CCSER2Q9H7U1 834 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 CAPN10Q9HC96 672 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 SMURF1Q9HCE7 757 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 IL23AQ9NPF7 189 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ARHGEF4Q9NR80 690 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 ANKFY1Q9P2R3 1169 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 RNF7Q9UBF6 113 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PRKAG3Q9UGI9 489 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 EIF2B4Q9UI10 523 aaKnown RBP0.96□□□□□ -2.26
SNORD28-201ENST00000384706 VWA7Q9Y334 891 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 INSL6Q9Y581 213 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 PCDHA9Q9Y5H5 950 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 COX11Q9Y6N1 276 aa0.96□□□□□ -2.26
SNORD28-201ENST00000384706 COL11A2P13942 1736 aaPredicted RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms