RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 AK9Q5TCS8 1911 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 EMSYQ7Z589 1322 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 VCXQ9H320 206 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 PPP1R3GB7ZBB8 358 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 STXBP3O00186 592 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 FBXO33Q7Z6M2 555 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 HACE1Q8IYU2 909 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.54
SGCB-201ENST00000381431 NOC2LQ9Y3T9 749 aaKnown RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 SYNGAP1Q96PV0 1343 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 IRX4P78413 519 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 SRRM1Q8IYB3 904 aaKnown RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 PDIK1LQ8N165 341 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 AFAP1L2Q8N4X5 818 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 CDKL2Q92772 493 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 FAM81BQ96LP2 452 aa18.42■□□□□ 0.54
SGCB-201ENST00000381431 INTS2Q9H0H0 1204 aaKnown RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
SGCB-201ENST00000381431 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
SGCB-201ENST00000381431 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 ITKQ08881 620 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 DCLK2Q8N568 766 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 PYROXD1Q8WU10 500 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 P4HBP07237 508 aaKnown RBP18.41■□□□□ 0.54
SGCB-201ENST00000381431 PEX19P40855 299 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 REXO1L1PQ8IX06 675 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 C7orf25Q9BPX7 421 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 SAYSD1Q9NPB0 183 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 CLDN3O15551 220 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 PDHBP11177 359 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 SUPT20HL1Q3ZLR7 823 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 CEP55Q53EZ4 464 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 ARMC9Q7Z3E5 817 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 GOLPH3Q9H4A6 298 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 DIP2CQ9Y2E4 1556 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 CNGA1P29973 690 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 RPS6KA2Q15349 733 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 ZNF564Q8TBZ8 553 aaPredicted RBP18.41■□□□□ 0.54
SGCB-201ENST00000381431 HEXIM2Q96MH2 286 aaKnown RBP18.41■□□□□ 0.54
SGCB-201ENST00000381431 EDEM3Q9BZQ6 932 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 RNF146Q9NTX7 359 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 FBXL5Q9UKA1 691 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 ZHX2Q9Y6X8 837 aa18.41■□□□□ 0.54
SGCB-201ENST00000381431 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
SGCB-201ENST00000381431 NDUFB10O96000 172 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 SLC9A1P19634 815 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 GABBR1Q9UBS5 961 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 CPP00450 1065 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 SLC18A3Q16572 532 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 LMBRD2Q68DH5 695 aaPredicted RBP18.4■□□□□ 0.54
SGCB-201ENST00000381431 SWSAP1Q6NVH7 229 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 HAUS6Q7Z4H7 955 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 DNAAF3Q8N9W5 541 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 MCPH1Q8NEM0 835 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 NUP85Q9BW27 656 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 TACC3Q9Y6A5 838 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 GOLGA8MH3BSY2 632 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 ADRA2BP18089 450 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 PDZD4Q76G19 769 aaPredicted RBP18.4■□□□□ 0.54
SGCB-201ENST00000381431 IQGAP1P46940 1657 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
SGCB-201ENST00000381431 ZNF18P17022 549 aa18.39■□□□□ 0.54
SGCB-201ENST00000381431 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.54
SGCB-201ENST00000381431 GUCY1A3Q02108 690 aa18.39■□□□□ 0.54
SGCB-201ENST00000381431 PPP6R3Q5H9R7 873 aaPredicted RBP18.39■□□□□ 0.54
SGCB-201ENST00000381431 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.54
SGCB-201ENST00000381431 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.54
SGCB-201ENST00000381431 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.54
SGCB-201ENST00000381431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.54
SGCB-201ENST00000381431 HPSEQ9Y251 543 aa18.39■□□□□ 0.54
SGCB-201ENST00000381431 ITIH6Q6UXX5 1313 aa18.39■□□□□ 0.54
SGCB-201ENST00000381431 GUCY2CP25092 1073 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 DPY19L2Q6NUT2 758 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 CYFIP1Q7L576 1253 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 TBC1D22BQ9NU19 505 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 PRPSAP2O60256 369 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 UCHL3P15374 230 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 PSMA2P25787 234 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 GCKP35557 465 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 RFFLQ8WZ73 363 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 NUF2Q9BZD4 464 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 ZNF277Q9NRM2 450 aaPredicted RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 SEL1LQ9UBV2 794 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 MAGEA9P43362 315 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 BEND6Q5SZJ8 279 aaPredicted RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 TRIM59Q8IWR1 403 aa18.39■□□□□ 0.53
SGCB-201ENST00000381431 PDCD7Q8N8D1 485 aaKnown RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 PRPF38AQ8NAV1 312 aaKnown RBP18.39■□□□□ 0.53
SGCB-201ENST00000381431 PDXKO00764 312 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms