RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ADGRL3Q9HAR2 1447 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 PHRF1Q9P1Y6 1649 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 A0A0D9SFI3 127 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ZNF500O60304 480 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 DDX58O95786 925 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 CPP00450 1065 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 FUCA1P04066 466 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 CHGBP05060 677 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 TPM2P07951 284 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 SNRPB2P08579 225 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 IGFBP6P24592 240 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 ECI1P42126 302 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 STK3Q13188 491 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 HSP90AA2PQ14568 343 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 CCDC183Q5T5S1 534 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 VPS53Q5VIR6 699 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 E4F1Q66K89 784 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 MBLAC2Q68D91 279 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 FAM173BQ6P4H8 233 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 GIMAP6Q6P9H5 292 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ZNF790Q6PG37 636 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 COPS6Q7L5N1 327 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 NPLOC4Q8TAT6 608 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 MAP4K1Q92918 833 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ZSCAN31Q96LW9 406 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 RNF38Q9H0F5 515 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 RXFP1Q9HBX9 757 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ST7Q9NRC1 585 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ZKSCAN5Q9Y2L8 839 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 AFDNP55196 1824 aaKnown RBP4.36□□□□□ -1.71
SMC6-202ENST00000381272 NCAPD2Q15021 1401 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 UTYO14607 1347 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 SCN11AQ9UI33 1791 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 ZBTB7AO95365 584 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 SCG5P05408 212 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 NCAM1P13591 858 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 ZKSCAN1P17029 563 aaPredicted RBP4.36□□□□□ -1.71
SMC6-202ENST00000381272 KCNJ6P48051 423 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 UBE2HP62256 183 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 TFCP2Q12800 502 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 GCKRQ14397 625 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 DDR2Q16832 855 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 INF2Q27J81 1249 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 ZNF589Q86UQ0 364 aaPredicted RBP4.36□□□□□ -1.71
SMC6-202ENST00000381272 FERMT3Q86UX7 667 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 NLGN1Q8N2Q7 840 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 PLEKHO2Q8TD55 490 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 ALG3Q92685 438 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 TSPAN17Q96FV3 270 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 TM6SF1Q9BZW5 370 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 SLC52A2Q9HAB3 445 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 BTG4Q9NY30 223 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 MARCH2Q9P0N8 246 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 USP25Q9UHP3 1055 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 HDAC5Q9UQL6 1122 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 FAN1Q9Y2M0 1017 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 USP16Q9Y5T5 823 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMC6-202ENST00000381272 TRPM3Q9HCF6 1732 aaPredicted RBP4.36□□□□□ -1.71
SMC6-202ENST00000381272 SLIT3O75094 1523 aa4.36□□□□□ -1.71
SMC6-202ENST00000381272 HIP1O00291 1037 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 MEFVO15553 781 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 KLF4O43474 513 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 ADCY5O95622 1261 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 NTRK1P04629 796 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 PHKG2P15735 406 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 BMP7P18075 431 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 CYP4F3Q08477 520 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 NEXNQ0ZGT2 675 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 KCNAB2Q13303 367 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 CHRNA2Q15822 529 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 SLC10A6Q3KNW5 377 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 BLOC1S2Q6QNY1 142 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 CCDC129Q6ZRS4 1044 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 CELF2-AS1Q8N7Q2 184 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 RAPGEF4Q8WZA2 1011 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 DPF3Q92784 378 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 DIO2Q92813 273 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 ZNF496Q96IT1 587 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 SEC62Q99442 399 aaKnown RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 TIMM13Q9Y5L4 95 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 OVOS2A0A0G2JMS6 1433 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 KDM6AO15550 1401 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 NPHP4O75161 1426 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 CAMTA1Q9Y6Y1 1673 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 C22orf46C9J442 243 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 AP5Z1O43299 807 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 MYO1BO43795 1136 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 RRP9O43818 475 aaKnown RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 TAF5LO75529 589 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 LETM1O95202 739 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 ASGR2P07307 311 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 PSMA5P28066 241 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 LIMS1P48059 325 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 RFX5P48382 616 aaPredicted RBP4.35□□□□□ -1.71
SMC6-202ENST00000381272 GTF2A2P52657 109 aa4.35□□□□□ -1.71
SMC6-202ENST00000381272 GFRA1P56159 465 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms