RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PDCP20941 246 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 IGFBP4P22692 258 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 QARSP47897 775 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 EMP3P54852 163 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 TMEM62Q0P6H9 643 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 CTTNQ14247 550 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 MBTPS1Q14703 1052 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 GPNMBQ14956 572 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 MTERF2Q49AM1 385 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 XKR3Q5GH77 459 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 METTL13Q8N6R0 699 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 VWCEQ96DN2 955 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 INTS4Q96HW7 963 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 DYDC2Q96IM9 177 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 NKX2-4Q9H2Z4 354 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 YBX2Q9Y2T7 364 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 PCDHB6Q9Y5E3 794 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 PCDHA11Q9Y5I1 949 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 TRPV2Q9Y5S1 764 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 CDY2AQ9Y6F7 541 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 MUC6Q6W4X9 2439 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 SMIM35A0A1B0GVV1 85 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 MAGEB2O15479 319 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 C22orf31O95567 290 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 CHRNA1P02708 482 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 CXCL10P02778 98 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 RPLP2P05387 115 aaKnown RBP10.34□□□□□ -0.75
HMGN1-202ENST00000380747 TECP42680 631 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 CYP4A11Q02928 519 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 MGAT3Q09327 533 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-202ENST00000380747 TMEM266Q2M3C6 531 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 RILPL1Q5EBL4 403 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 IER5Q5VY09 327 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 PLA2G4FQ68DD2 849 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 CNKSR3Q6P9H4 555 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 RPAINQ86UA6 219 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 FERMT3Q86UX7 667 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 TPH2Q8IWU9 490 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 DBF4BQ8NFT6 615 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 SEPT8Q92599 483 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 TATDN2Q93075 761 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 PPP1R16BQ96T49 567 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 EIF2AK1Q9BQI3 630 aaKnown RBP10.34□□□□□ -0.75
HMGN1-202ENST00000380747 SH2D3AQ9BRG2 576 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 LXNQ9BS40 222 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 GINS2Q9Y248 185 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 SLC4A7Q9Y6M7 1214 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
HMGN1-202ENST00000380747 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 POTEMA6NI47 508 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 SLITRK3O94933 977 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 STBD1O95210 358 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 GHRP10912 638 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 SYT1P21579 422 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 KCNJ6P48051 423 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 CLCN3P51790 818 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 IKBKEQ14164 716 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 TCTN1Q2MV58 587 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 EFCAB12Q6NXP0 572 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 ANO5Q75V66 913 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 C4orf19Q8IY42 314 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 KIAA0319LQ8IZA0 1049 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 NME8Q8N427 588 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 LRRC71Q8N4P6 559 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 C4orf32Q8N8J7 132 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 NEK9Q8TD19 979 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 CEP170P1Q96L14 293 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 MAP7D2Q96T17 732 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 CELF4Q9BZC1 486 aaKnown RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 OSBPL7Q9BZF2 842 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 ZSWIM4Q9H7M6 989 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 WRAP73Q9P2S5 460 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 COG5Q9UP83 839 aa10.33□□□□□ -0.76
HMGN1-202ENST00000380747 PRRC2BQ5JSZ5 2229 aaKnown RBP10.33□□□□□ -0.76
HMGN1-202ENST00000380747 ABHD14A-ACY1A0A1B0GW23 586 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 BAIAP3O94812 1187 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 VTNP04004 478 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 ATP2A2P16615 1042 aaKnown RBP10.32□□□□□ -0.76
HMGN1-202ENST00000380747 TMOD1P28289 359 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 YWHABP31946 246 aaKnown RBP10.32□□□□□ -0.76
HMGN1-202ENST00000380747 NPEPPSP55786 919 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 LPIN1Q14693 890 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 PLEKHG4Q58EX7 1191 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 OTUD6AQ7L8S5 288 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
HMGN1-202ENST00000380747 ERMNQ8TAM6 284 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms