RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GBP3Q9H0R5 595 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 TMEM206Q9H813 350 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 WRAP73Q9P2S5 460 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 WDR64B1ANS9 1081 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 DDX39AO00148 427 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 HIP1RO75146 1068 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 PPP1R37O75864 691 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 PRLRP16471 622 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 EIF2AK2P19525 551 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 PSMC5P62195 406 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 CYP27A1Q02318 531 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 MAPK7Q13164 816 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 ITGB3BPQ13352 177 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 COG2Q14746 738 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 SUPT20HL1Q3ZLR7 823 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 IQCEQ6IPM2 695 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 FAM186BQ8IYM0 893 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 MSANTD4Q8NCY6 345 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 REPS2Q8NFH8 660 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC35C1Q96A29 364 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 ATG4CQ96DT6 458 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 IWS1Q96ST2 819 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 LACRTQ9GZZ8 138 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 R3HDMLQ9H3Y0 253 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 ST6GALNAC4Q9H4F1 302 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 DMAC2Q9NW81 257 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 JRKLQ9Y4A0 524 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 SAMM50Q9Y512 469 aa11.46□□□□□ -0.57
POLR2J3-201ENST00000379340 CCDC151A5D8V7 595 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 RARRES1P49788 294 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 RAPGEF1Q13905 1077 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ZNF746Q6NUN9 644 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 C12orf56Q8IXR9 622 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 HVCN1Q96D96 273 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 BORCS6Q96GS4 357 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 CDHR1Q96JP9 859 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SPAG5Q96R06 1193 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 FAM53CQ9NYF3 392 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 K7ENM7 598 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 CLIC2O15247 247 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 MAPK13O15264 365 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 TLR2O60603 784 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ERLIN1O75477 346 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 MYCLP12524 364 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 PLS3P13797 630 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 UCHL3P15374 230 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ERCC3P19447 782 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 RFX1P22670 979 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 MCM3P25205 808 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 PON1P27169 355 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 PRKCIP41743 596 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SLC18A3Q16572 532 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 TCERG1LQ5VWI1 586 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 CATSPERGQ6ZRH7 1159 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 KRT222Q8N1A0 295 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 VTI1AQ96AJ9 217 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ACCSQ96QU6 501 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 CRACR2AQ9BSW2 395 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 TEX13BQ9BXU2 312 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 ACAD9Q9H845 621 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 AGPAT3Q9NRZ7 376 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 PUF60Q9UHX1 559 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 RAB21Q9UL25 225 aa11.45□□□□□ -0.58
POLR2J3-201ENST00000379340 NFASCO94856 1347 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 MACROD2A1Z1Q3 448 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ZBTB39O15060 712 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 N4BP1O75113 896 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 GFPT2O94808 682 aa11.44□□□□□ -0.58
POLR2J3-201ENST00000379340 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms