RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 NAIF1Q69YI7 327 aaPredicted RBP12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 H2AFVQ71UI9 128 aa12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
TM9SF2-201ENST00000376387 DDX3YO15523 660 aaKnown RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 CDK8P49336 464 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 CASP4P49662 377 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 ADCY7P51828 1080 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 KCNQ4P56696 695 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 SF3B3Q15393 1217 aaKnown RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 CENPTQ96BT3 561 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 GPR101Q96P66 508 aaPredicted RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 G3BP2Q9UN86 482 aaKnown RBP12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 RABL2BQ9UNT1 228 aa12.46□□□□□ -0.42
TM9SF2-201ENST00000376387 UBOX5O94941 541 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 GNA14O95837 355 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 CYP11B2P19099 503 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 DR1Q01658 176 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 LRRC14Q15048 493 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 DUPD1Q68J44 220 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 KIF2BQ8N4N8 673 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 RAB34Q9BZG1 259 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 RPTORQ8N122 1335 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 ROBO3Q96MS0 1386 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 CETN3O15182 167 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 PPP1R11O60927 126 aaPredicted RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 AKAP3O75969 853 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 IFI16Q16666 785 aaKnown RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 TCERG1LQ5VWI1 586 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 SPICE1Q8N0Z3 855 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 SLC35G2Q8TBE7 412 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 EBF2Q9HAK2 575 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 DIS3Q9Y2L1 958 aaKnown RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
TM9SF2-201ENST00000376387 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ASAP2O43150 1006 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 AFPP02771 609 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 FGFR4P22455 802 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 CCNHP51946 323 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 EPHA7Q15375 998 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 FOXR2Q6PJQ5 311 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 TRIM74Q86UV6 250 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 TRIM73Q86UV7 250 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 GLYCTKQ8IVS8 523 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 CCDC65Q8IXS2 484 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 P3H4Q92791 437 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 C18orf8Q96DM3 657 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ERP44Q9BS26 406 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 PABPC3Q9H361 631 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 KCNMB3Q9NPA1 279 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 INTS9Q9NV88 658 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 HGSO14964 777 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 FLOT1O75955 427 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 RARAP10276 462 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 CREB1P16220 341 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 RFC4P35249 363 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 PTENP60484 403 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 PSMC6P62333 389 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 KCNA1Q09470 495 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ZC3H3Q8IXZ2 948 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 MGARPQ8TDB4 240 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ZNF570Q96NI8 536 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 MLXIPLQ9NP71 852 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 TAS2R14Q9NYV8 317 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 PCDHA12Q9UN75 941 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 A0A1B0GUA9 196 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 EIF4E1BA6NMX2 242 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 MEIS1O00470 390 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 MED24O75448 989 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 JAM2P57087 298 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 DENND2CQ68D51 928 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
TM9SF2-201ENST00000376387 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms