RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 KCNA1Q09470 495 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 PRPF4BQ13523 1007 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 EPHA7Q15375 998 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 AGBL2Q5U5Z8 902 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CPLX4Q7Z7G2 160 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 SLF2Q8IX21 1173 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 RASGEF1CQ8N431 466 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CD2APQ9Y5K6 639 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CCDC188H7C350 402 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CAND2O75155 1236 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 SHBGP04278 402 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 SNHG28P0DPA3 235 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 PRELPP51888 382 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 GALCP54803 685 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 IFFO1Q0D2I5 559 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 GIT2Q14161 759 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 PLCB4Q15147 1175 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 KNOP1Q1ED39 458 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CACNA2D3Q8IZS8 1091 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 CCDC26Q8TAB7 109 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
CLCNKA-202ENST00000375692 FRMD3A2A2Y4 597 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 RAD21O60216 631 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 BUB1BO60566 1050 aaPredicted RBP15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 PRKCIP41743 596 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 CDR1P51861 262 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 FUKQ8N0W3 1084 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 TATDN2Q93075 761 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 REEP2Q9BRK0 252 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 SLITRK6Q9H5Y7 841 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 GCNT4Q9P109 453 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 PNMA2Q9UL42 364 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 UTP11Q9Y3A2 253 aaKnown RBP15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 PCDHB13Q9Y5F0 798 aa15.33■□□□□ 0.05
CLCNKA-202ENST00000375692 ABCB4P21439 1286 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 RDXP35241 583 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 SCTRP47872 440 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 TCP10Q12799 353 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 DRP2Q13474 957 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 CYB5D1Q6P9G0 228 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 ATP8B4Q8TF62 1192 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 LMBR1Q8WVP7 490 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 GLG1Q92896 1179 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 HES6Q96HZ4 224 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 TRAF3IP3Q9Y228 551 aa15.33■□□□□ 0.04
CLCNKA-202ENST00000375692 OPLAHO14841 1288 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 DRD4P21917 467 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 JAM2P57087 298 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 ZNF211Q13398 564 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 DCAF12L1Q5VU92 463 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 GLYCTKQ8IVS8 523 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 PARP9Q8IXQ6 854 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 TAOK3Q9H2K8 898 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 ACTR5Q9H9F9 607 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 GOPCQ9HD26 462 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 IGSF9BQ9UPX0 1349 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 SFI1A8K8P3 1242 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 PLCG2P16885 1265 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 GKAP1Q5VSY0 366 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 CEP57Q86XR8 500 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 SLC35G2Q8TBE7 412 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 SEC14L1Q92503 715 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 SLC35C1Q96A29 364 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 ERVK-5Q9HDB9 667 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 AMFRQ9UKV5 643 aa15.32■□□□□ 0.04
CLCNKA-202ENST00000375692 TLDC2A0PJX2 215 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SMIM23A6NLE4 172 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 ZBTB5O15062 677 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 NR3C1P04150 777 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 PAEPP09466 180 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 CXCL9Q07325 125 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 UBAP2Q5T6F2 1119 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 ZDHHC15Q96MV8 337 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SCLT1Q96NL6 688 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 FMO2Q99518 471 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 EVI5O60447 810 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 TTLL1O95922 423 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms