RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
MCF2L-202ENST00000375597 KAZNQ674X7 775 aa12.78□□□□□ -0.36
MCF2L-202ENST00000375597 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
MCF2L-202ENST00000375597 DDX23Q9BUQ8 820 aaKnown RBP12.78□□□□□ -0.36
MCF2L-202ENST00000375597 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
MCF2L-202ENST00000375597 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
MCF2L-202ENST00000375597 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 PASD1Q8IV76 773 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 LRRC34Q8IZ02 419 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 ERMNQ8TAM6 284 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 SAAL1Q96ER3 474 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 PSMD1Q99460 953 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 TMBIM4Q9HC24 238 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 TSKSQ9UJT2 592 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 NID2Q14112 1375 aa12.77□□□□□ -0.36
MCF2L-202ENST00000375597 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 CCDC169A6NNP5 214 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 FOXN3O00409 490 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 SHOX2O60902 331 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 USP11P51784 963 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 SOX10P56693 466 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 DLG4P78352 724 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 RUFY4Q6ZNE9 571 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 RNF10Q8N5U6 811 aaKnown RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 SLC17A8Q8NDX2 589 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 VEZTQ9HBM0 779 aa12.77□□□□□ -0.37
MCF2L-202ENST00000375597 TTC7AQ9ULT0 858 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-202ENST00000375597 H0Y3Z8 333 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 K7ENM7 598 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 FTLP02792 175 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SNCBQ16143 134 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 ASTE1Q2TB18 679 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 ALG3Q92685 438 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 MAGEF1Q9HAY2 307 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 FRMD4BQ9Y2L6 1034 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 A8MUI8 341 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 NEBLO76041 1014 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 FAM107AO95990 144 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 GH2P01242 217 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SESN3P58005 492 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 GIT2Q14161 759 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 NUGGCQ68CJ6 796 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 IRF2BP2Q7Z5L9 587 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 CAVIN3Q969G5 261 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 ACSF2Q96CM8 615 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 FGFR1OP2Q9NVK5 253 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 RHBDL3P58872 404 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 CLEC4GQ6UXB4 293 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 TMX4Q9H1E5 349 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-202ENST00000375597 GANQ9H2C0 597 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
MCF2L-202ENST00000375597 SERPINB2P05120 415 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ECE1P42892 770 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 PRR5LQ6MZQ0 368 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 DAGLBQ8NCG7 672 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 LNX1Q8TBB1 728 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 NCAPGQ9BPX3 1015 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 TDRD3Q9H7E2 651 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 CLDN3O15551 220 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 TOM1O60784 492 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 GAS7O60861 476 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 SPAG7O75391 227 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 RPL13P26373 211 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 PPP1R2P41236 205 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 MYL7Q01449 175 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 DHX38Q92620 1227 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 XIRP1Q702N8 1843 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 CENPFP49454 3210 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 DDTLA6NHG4 134 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 GOLGA8SH3BPF8 625 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 GOLGA8MH3BSY2 632 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 CYP26A1O43174 497 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 GJB6O95452 261 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 TM4SF1P30408 202 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms