RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-203ENST00000374610 IL23AQ9NPF7 189 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 DNAH12Q6ZR08 3092 aa16.91■□□□□ 0.3
PFDN6-203ENST00000374610 MKI67P46013 3256 aaKnown RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 CHRNA1P02708 482 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 PFKMP08237 780 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 ACRP10323 421 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 GHRP10912 638 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 CYP11B2P19099 503 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 CRYBB1P53674 252 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 RAD51AP2Q09MP3 1159 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 DRP2Q13474 957 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 MCM6Q14566 821 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 RESP18Q5W5W9 173 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 KCNK18Q7Z418 384 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 GPBP1Q86WP2 473 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 CEP57L1Q8IYX8 460 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 PRPF31Q8WWY3 499 aaKnown RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 DHX58Q96C10 678 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 OSMRQ99650 979 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 MTIF3Q9H2K0 278 aaKnown RBP16.9■□□□□ 0.3
PFDN6-203ENST00000374610 LOXHD1Q8IVV2 1947 aa16.9■□□□□ 0.3
PFDN6-203ENST00000374610 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
PFDN6-203ENST00000374610 FGBP02675 491 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 CMA1P23946 247 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 GPC3P51654 580 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 LAMTOR4Q0VGL1 99 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 NFX1Q12986 1120 aaKnown RBP16.89■□□□□ 0.29
PFDN6-203ENST00000374610 PAK2Q13177 524 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
PFDN6-203ENST00000374610 LINC01465Q8N7H1 131 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 USP38Q8NB14 1042 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 SEPT8Q92599 483 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 KIFAP3Q92845 792 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 DRC1Q96MC2 740 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 TIPINQ9BVW5 301 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 INO80BQ9C086 356 aaPredicted RBP16.89■□□□□ 0.29
PFDN6-203ENST00000374610 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 KCND2Q9NZV8 630 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 EVPLQ92817 2033 aa16.89■□□□□ 0.29
PFDN6-203ENST00000374610 A0A087WZ62 844 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 A0A1B0GVL5 298 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 RPS6KA5O75582 802 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 PHKA2P46019 1235 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 AMPD3Q01432 767 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 MGAT3Q09327 533 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
PFDN6-203ENST00000374610 PPP2R5AQ15172 486 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 CHRDL2Q6WN34 429 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 TSHZ1Q6ZSZ6 1077 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 KSR1Q8IVT5 923 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 FSIP1Q8NA03 581 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 RNF149Q8NC42 400 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 MRPS27Q92552 414 aaKnown RBP16.88■□□□□ 0.29
PFDN6-203ENST00000374610 FDXACB1Q9BRP7 624 aaPredicted RBP16.88■□□□□ 0.29
PFDN6-203ENST00000374610 RUSC1Q9BVN2 902 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
PFDN6-203ENST00000374610 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 GPRC5CQ9NQ84 441 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 XPNPEP1Q9NQW7 623 aa16.88■□□□□ 0.29
PFDN6-203ENST00000374610 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 GPR182O15218 404 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 NBNO60934 754 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 HIP1RO75146 1068 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
PFDN6-203ENST00000374610 GPR32O75388 356 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 IKBKEQ14164 716 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 FBXO47Q5MNV8 452 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 PRPF38BQ5VTL8 546 aaKnown RBP16.87■□□□□ 0.29
PFDN6-203ENST00000374610 CNKSR3Q6P9H4 555 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 C1orf186Q6ZWK4 172 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 ZBTB8OSQ8IWT0 167 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 DEPTORQ8TB45 409 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 APBB2Q92870 758 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 CCDC34Q96HJ3 373 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 CDHR5Q9HBB8 845 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 SQORQ9Y6N5 450 aa16.87■□□□□ 0.29
PFDN6-203ENST00000374610 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
PFDN6-203ENST00000374610 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
PFDN6-203ENST00000374610 TCHHQ07283 1943 aa16.86■□□□□ 0.29
PFDN6-203ENST00000374610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.86■□□□□ 0.29
PFDN6-203ENST00000374610 CCDC169A6NNP5 214 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms