RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TCTN1Q2MV58 587 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 Q7L0L9 218 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 KIAA0319LQ8IZA0 1049 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 LRRC71Q8N4P6 559 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 TIFAQ96CG3 184 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 SPATA32Q96LK8 384 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 IPO9Q96P70 1041 aaKnown RBP20.42■□□□□ 0.86
PBX3-205ENST00000373492 MTRQ99707 1265 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 CCSER1Q9C0I3 900 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 SCAND2PQ9GZW5 306 aaPredicted RBP20.42■□□□□ 0.86
PBX3-205ENST00000373492 DHX33Q9H6R0 707 aaKnown RBP20.42■□□□□ 0.86
PBX3-205ENST00000373492 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 PCDHA11Q9Y5I1 949 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 TRPV2Q9Y5S1 764 aa20.42■□□□□ 0.86
PBX3-205ENST00000373492 A0A087WWV3 80 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 IGKV6-21A0A0C4DH24 114 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 ARHGEF35A5YM69 484 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 DGAT1O75907 488 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 PBX2P40425 430 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 ME1P48163 572 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 EMC2Q15006 297 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 FBXO47Q5MNV8 452 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 ZNF710Q8N1W2 664 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 ZNF579Q8NAF0 562 aaKnown RBP20.41■□□□□ 0.86
PBX3-205ENST00000373492 USP38Q8NB14 1042 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 TCP11Q8WWU5 503 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 IFIH1Q9BYX4 1025 aaKnown RBP20.41■□□□□ 0.86
PBX3-205ENST00000373492 CELF4Q9BZC1 486 aaKnown RBP20.41■□□□□ 0.86
PBX3-205ENST00000373492 OSBPL7Q9BZF2 842 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 SEMA6BQ9H3T3 888 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 ATP6V0A4Q9HBG4 840 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 MTMR10Q9NXD2 777 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 CHMP5Q9NZZ3 219 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 RCOR1Q9UKL0 485 aa20.41■□□□□ 0.86
PBX3-205ENST00000373492 EYA4O95677 639 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 GHRP10912 638 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 TMEM62Q0P6H9 643 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 GRB10Q13322 594 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 MKRN4PQ13434 485 aaPredicted RBP20.4■□□□□ 0.86
PBX3-205ENST00000373492 LPIN1Q14693 890 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 SPECC1Q5M775 1068 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 HERC6Q8IVU3 1022 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 LINC01465Q8N7H1 131 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 SYMPKQ92797 1274 aaKnown RBP20.4■□□□□ 0.86
PBX3-205ENST00000373492 EPSTI1Q96J88 318 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 PNMA5Q96PV4 448 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 PLIN2Q99541 437 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 BHMT2Q9H2M3 363 aa20.4■□□□□ 0.86
PBX3-205ENST00000373492 GBF1Q92538 1859 aa20.39■□□□□ 0.86
PBX3-205ENST00000373492 E9PMD0 336 aa20.39■□□□□ 0.85
PBX3-205ENST00000373492 USO1O60763 962 aaKnown RBP20.39■□□□□ 0.85
PBX3-205ENST00000373492 VTNP04004 478 aa20.39■□□□□ 0.85
PBX3-205ENST00000373492 CDC42EP1Q00587 391 aa20.39■□□□□ 0.85
PBX3-205ENST00000373492 FAM43BQ6ZT52 329 aaPredicted RBP20.39■□□□□ 0.85
PBX3-205ENST00000373492 TTYH1Q9H313 450 aaPredicted RBP20.39■□□□□ 0.85
PBX3-205ENST00000373492 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.85
PBX3-205ENST00000373492 PTPRSQ13332 1948 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 AMHP03971 560 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 RABGGTBP53611 331 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 KARSQ15046 597 aaKnown RBP20.38■□□□□ 0.85
PBX3-205ENST00000373492 TMEM119Q4V9L6 283 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 PADI6Q6TGC4 694 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 MCPH1Q8NEM0 835 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 LEO1Q8WVC0 666 aaPredicted RBP20.38■□□□□ 0.85
PBX3-205ENST00000373492 PSPC1Q8WXF1 523 aaKnown RBP20.38■□□□□ 0.85
PBX3-205ENST00000373492 SCLT1Q96NL6 688 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 ZNF576Q9H609 170 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 SUCLA2Q9P2R7 463 aaPredicted RBP20.38■□□□□ 0.85
PBX3-205ENST00000373492 PCDHA7Q9UN72 937 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 GINS2Q9Y248 185 aa20.38■□□□□ 0.85
PBX3-205ENST00000373492 YBX2Q9Y2T7 364 aaKnown RBP20.38■□□□□ 0.85
PBX3-205ENST00000373492 PLCG1P19174 1290 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 DEFB103AP81534 67 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 USP49Q70CQ1 688 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 RHPN2Q8IUC4 686 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 FAM161BQ96MY7 647 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 SLC28A3Q9HAS3 691 aa20.37■□□□□ 0.85
PBX3-205ENST00000373492 ASAP2O43150 1006 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 GPR32O75388 356 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 SSBP05455 408 aaKnown RBP eCLIP20.36■□□□□ 0.85
PBX3-205ENST00000373492 CRYBB1P53674 252 aaPredicted RBP20.36■□□□□ 0.85
PBX3-205ENST00000373492 NLRP11P59045 1033 aaKnown RBP20.36■□□□□ 0.85
PBX3-205ENST00000373492 DRP2Q13474 957 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 KIZQ2M2Z5 673 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 RRAGBQ5VZM2 374 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.36■□□□□ 0.85
PBX3-205ENST00000373492 CCDC73Q6ZRK6 1079 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 KCNK18Q7Z418 384 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 NLRP7Q8WX94 980 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 TMEM143Q96AN5 459 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 PPP1R16BQ96T49 567 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 FTHL17Q9BXU8 183 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 NKX2-4Q9H2Z4 354 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 AGO3Q9H9G7 860 aaKnown RBP20.36■□□□□ 0.85
PBX3-205ENST00000373492 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
PBX3-205ENST00000373492 TLL1O43897 1013 aa20.35■□□□□ 0.85
PBX3-205ENST00000373492 GJB5O95377 273 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms