RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PABPC4Q13310 644 aaKnown RBP eCLIP12.13□□□□□ -0.475e-9■■■□□ 18.2
RPRD1B-201ENST00000373433 XRCC4Q13426 336 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 SELENOSQ9BQE4 189 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 KIF3CO14782 793 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 RTN2O75298 545 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 FCER1AP12319 257 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 CCNE1P24864 410 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 PTGER2P43116 358 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 ZNF844Q08AG5 666 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 SV2BQ7L1I2 683 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 SLC12A6Q9UHW9 1150 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
RPRD1B-201ENST00000373433 SMIM23A6NLE4 172 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 KCNK3O14649 394 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 GAS7O60861 476 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 LDHDQ86WU2 507 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 LONP1P36776 959 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 HSPA9P38646 679 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 STK4Q13043 487 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 AP1ARQ63HQ0 302 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 CEP120Q8N960 986 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 CCDC197Q8NCU1 140 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 AP1M1Q9BXS5 423 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 MYH7P12883 1935 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 FZD9O00144 591 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 TBCAO75347 108 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ANP32DO95626 131 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 CDK17Q00537 523 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 C2orf69Q8N8R5 385 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 TATDN2Q93075 761 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 BICD1Q96G01 975 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 TRIM31Q9BZY9 425 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 MGRN1O60291 552 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 CEP104O60308 925 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 EIF2AK2P19525 551 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 SNRNP48Q6IEG0 339 aaKnown RBP12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 MAGEC3Q8TD91 643 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 ERGIC2Q96RQ1 377 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 GMLQ99445 158 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 NDST4Q9H3R1 872 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 SLC39A2Q9NP94 309 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
RPRD1B-201ENST00000373433 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 TLDC2A0PJX2 215 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 LAD1O00515 517 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 KCNB1Q14721 858 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 CCT6BQ92526 530 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 GGT7Q9UJ14 662 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 A0A1W2PQJ5 194 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 KLRC4O43908 158 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 SLC8A3P57103 927 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 CYP4A11Q02928 519 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 BIRC3Q13489 604 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
RPRD1B-201ENST00000373433 DNAJC18Q9H819 358 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms