RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 LRRC74AQ0VAA2 488 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 SHROOM1Q2M3G4 852 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ARHGAP15Q53QZ3 475 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 SATB2Q9UPW6 733 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 AOX1Q06278 1338 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 hCG_1642624A0A1W2PR95 340 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 HPGDP15428 266 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 NAALADL2Q58DX5 795 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 LVRNQ6Q4G3 990 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 MRFAP1L1Q96HT8 127 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ABCC1P33527 1531 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 MTRF1O75570 445 aaKnown RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF699Q32M78 642 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF544Q6NX49 715 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 DPH5Q9H2P9 285 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 RNF103-CHMP3A0A140T963 221 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF667Q5HYK9 610 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ST13P5Q8NFI4 369 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 VPS50Q96JG6 964 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 FYNP06241 537 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 SPDYAQ5MJ70 313 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 GCOM2Q9BZD3 368 aaPredicted RBP9.68□□□□□ -0.86
CSMD2-205ENST00000373381 ARHGEF3Q9NR81 526 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
CSMD2-205ENST00000373381 LDHAP00338 332 aaKnown RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ERAP2Q6P179 960 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 IP6K1Q92551 441 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 XPO6Q96QU8 1125 aaKnown RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 NBNO60934 754 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 CEP95Q96GE4 821 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 PTPROQ16827 1216 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 TNIP2Q8NFZ5 429 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 LRRN2O75325 713 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SLFN14P0C7P3 912 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 PEX19P40855 299 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 MAD2L2Q9UI95 211 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 UHRF1BP1Q6BDS2 1440 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 TBC1D4O60343 1298 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SDK1Q7Z5N4 2213 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 PEX1O43933 1283 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 TTLL4Q14679 1199 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 WDR75Q8IWA0 830 aaKnown RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 RAB23Q9ULC3 237 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ATP11BQ9Y2G3 1177 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ARHGEF11O15085 1522 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 PSMD14O00487 310 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 MXI1P50539 228 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 EHHADHQ08426 723 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 TCP11X2Q5H9J9 407 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 OSCP1Q8WVF1 389 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SEC24BO95487 1268 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 COG1Q8WTW3 980 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SNX21Q969T3 373 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 TIMM10P62072 90 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 OSBPL6Q9BZF3 934 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ZNF304Q9HCX3 659 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 S100A5P33763 92 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 ARL4CP56559 192 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 USP39Q53GS9 565 aaKnown RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 CIAPIN1Q6FI81 312 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 FAM160B2Q86V87 743 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 RNASE11Q8TAA1 199 aaKnown RBP9.67□□□□□ -0.86
CSMD2-205ENST00000373381 SMARCAL1Q9NZC9 954 aa9.67□□□□□ -0.86
CSMD2-205ENST00000373381 DDHD2O94830 711 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 HDAC6Q9UBN7 1215 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 IGF1RP08069 1367 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 IL10P22301 178 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 TMPRSS15P98073 1019 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 CDK17Q00537 523 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 BBS9Q3SYG4 887 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 KRT40Q6A162 431 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 CCDC24Q8N4L8 307 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 UVRAGQ9P2Y5 699 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 USP17L21D6R901 530 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 KRT16P08779 473 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 AMPD2Q01433 879 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 UBE3AQ05086 875 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 SKA1Q96BD8 255 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
CSMD2-205ENST00000373381 DBNLQ9UJU6 430 aaKnown RBP9.66□□□□□ -0.86
CSMD2-205ENST00000373381 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms