RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
PABPC4-202ENST00000372857 GFPT2O94808 682 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 KRT16P08779 473 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 NUDT17P0C025 328 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 CASP5P51878 434 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 PTENP60484 403 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 IRX1P78414 480 aaPredicted RBP17.15■□□□□ 0.34
PABPC4-202ENST00000372857 GRIK3Q13003 919 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 FAM196AQ6ZSG2 479 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 MAEAQ7L5Y9 396 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 FGFR1OP2Q9NVK5 253 aa17.15■□□□□ 0.34
PABPC4-202ENST00000372857 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.34
PABPC4-202ENST00000372857 ENO4A6NNW6 628 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 RAD21O60216 631 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 UBE2SQ16763 222 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 CCDC65Q8IXS2 484 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 ZNF483Q8TF39 744 aaPredicted RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 DYDC1Q8WWB3 177 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 FAM167BQ9BTA0 163 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 BATF3Q9NR55 127 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 PNMA3Q9UL41 463 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 BZW2Q9Y6E2 419 aaKnown RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 UPP2O95045 317 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 TM4SF1P30408 202 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 PICALMQ13492 652 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 CAPRIN2Q6IMN6 1127 aaKnown RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 ZDHHC24Q6UX98 284 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 JAMLQ86YT9 394 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 ARMC2Q8NEN0 867 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 CCHCR1Q8TD31 782 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 KCNV2Q8TDN2 545 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 KLHL29Q96CT2 875 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 TMOD4Q9NZQ9 345 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 ARMCX3Q9UH62 379 aaPredicted RBP17.14■□□□□ 0.33
PABPC4-202ENST00000372857 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
PABPC4-202ENST00000372857 SNX3O60493 162 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 RASA1P20936 1047 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 PDIA5Q14554 519 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 VPS36Q86VN1 386 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 SLC35G2Q8TBE7 412 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 NSRP1Q9H0G5 558 aaKnown RBP17.13■□□□□ 0.33
PABPC4-202ENST00000372857 AFPP02771 609 aaKnown RBP17.13■□□□□ 0.33
PABPC4-202ENST00000372857 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 POTECB2RU33 542 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 RIMBP2O15034 1052 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 CNGA2Q16280 664 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
PABPC4-202ENST00000372857 USP17L5A8MUK1 530 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 FOXO6A8MYZ6 492 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 KIF3CO14782 793 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 DDX3YO15523 660 aaKnown RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 FOXR2Q6PJQ5 311 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 GOLGA6L10A0A0M3HER8 536 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 ADCY7P51828 1080 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 CCDC25Q86WR0 208 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 HAS1Q92839 578 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
PABPC4-202ENST00000372857 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-202ENST00000372857 UFL1O94874 794 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 AGTP01019 485 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 XRCC5P13010 732 aaKnown RBP17.11■□□□□ 0.33
PABPC4-202ENST00000372857 CREB1P16220 341 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 C6orf118Q5T5N4 469 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 YIPF3Q9GZM5 350 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
PABPC4-202ENST00000372857 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 SMNDC1O75940 238 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■□□ 18.2
PABPC4-202ENST00000372857 ALADP13716 330 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 PRKCIP41743 596 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 RPL21P46778 160 aaKnown RBP17.11■□□□□ 0.33
PABPC4-202ENST00000372857 PDE6CP51160 858 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
PABPC4-202ENST00000372857 ALG3Q92685 438 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 EYA3Q99504 573 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
PABPC4-202ENST00000372857 NENFQ9UMX5 172 aa17.11■□□□□ 0.33
PABPC4-202ENST00000372857 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms