RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PCGF5Q86SE9 256 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 PSPC1Q8WXF1 523 aaKnown RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 TOPORSQ9NS56 1045 aaPredicted RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 RASGRF2O14827 1237 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 TEX33O43247 280 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 CTDNEP1O95476 244 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 FGGP02679 453 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 EDRF1Q3B7T1 1238 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.27□□□□□ -0.61
NUP188-201ENST00000372577 ADAM22Q9P0K1 906 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SEPT10Q9P0V9 454 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 CNOT8Q9UFF9 292 aaKnown RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 SRGNP10124 158 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.617e-7■■■■□ 20.1
NUP188-201ENST00000372577 CENPUQ71F23 418 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 CNPY4Q8N129 248 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 MID2Q9UJV3 735 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 PCDHA10Q9Y5I2 948 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 LRRD1A4D1F6 860 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 FAM149B1Q96BN6 582 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 CCDC68Q9H2F9 335 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 POC1B-GALNT4F8VUJ3 575 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 TFDP2Q14188 446 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 DARS2Q6PI48 645 aaKnown RBP11.26□□□□□ -0.61
NUP188-201ENST00000372577 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 MRFAP1Q9Y605 127 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 MST1RQ04912 1400 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 PDHBP11177 359 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 NR1D1P20393 614 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 NR1H3Q13133 447 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
NUP188-201ENST00000372577 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 SLITRK6Q9H5Y7 841 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 FOXN1O15353 648 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 HIP1RO75146 1068 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 EFNA5P52803 228 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 SH2D4BQ5SQS7 431 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 HEXIM2Q96MH2 286 aaKnown RBP11.26□□□□□ -0.61
NUP188-201ENST00000372577 OSBPL9Q96SU4 736 aa11.26□□□□□ -0.61
NUP188-201ENST00000372577 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 SLC16A4O15374 487 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 ZMYND10O75800 440 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 MMP14P50281 582 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 TAP1Q03518 808 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 DMTNQ08495 405 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 SNX1Q13596 522 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 NR1I3Q14994 352 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 ARL13BQ3SXY8 428 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CCDC38Q502W7 563 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CC2D1AQ6P1N0 951 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 PDIK1LQ8N165 341 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 GPD1LQ8N335 351 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 DDX23Q9BUQ8 820 aaKnown RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 MRPL4Q9BYD3 311 aaKnown RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 BAIAP2L1Q9UHR4 511 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 FOXP2O15409 715 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 SOX5P35711 763 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 PDE1BQ01064 536 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 INTS5Q6P9B9 1019 aaKnown RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 ZRANB2O95218 330 aaKnown RBP eCLIP11.25□□□□□ -0.61
NUP188-201ENST00000372577 CD58P19256 250 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CHRNA3P32297 505 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 GCLMP48507 274 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CCT5P48643 541 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 GFPT1Q06210 699 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 DRAP1Q14919 205 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 TTC25Q96NG3 672 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■■□ 21.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms