RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
PTCH2-201ENST00000372192 CARD9Q9H257 536 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 TXLNGQ9NUQ3 528 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 ANAPC5Q9UJX4 755 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 SUFUQ9UMX1 484 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 CEP83Q9Y592 693 aa12.32□□□□□ -0.44
PTCH2-201ENST00000372192 PFASO15067 1338 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 SLC26A4O43511 780 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 AKR1B1P15121 316 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 JAMLQ86YT9 394 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 FLT1P17948 1338 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 TROVE2P10155 538 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 CYP11B2P19099 503 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 REEP2Q9BRK0 252 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
PTCH2-201ENST00000372192 MAPK4P31152 587 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 MXI1P50539 228 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 MXRA7P84157 204 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 LRRC14Q15048 493 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 PPP2R5AQ15172 486 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 MIER3Q7Z3K6 550 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 LRRC8CQ8TDW0 803 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 HOOK2Q96ED9 719 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 VCXQ9H320 206 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
PTCH2-201ENST00000372192 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 GGPS1O95749 300 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 POLR2MP0CAP2 368 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 FGFR4P22455 802 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 PON1P27169 355 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 ITPK1Q13572 414 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 SCFD1Q8WVM8 642 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TEKT3Q9BXF9 490 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TMEM206Q9H813 350 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 LCA5LO95447 670 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 DESP17661 470 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 UAP1Q16222 522 aaPredicted RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 PHF2O75151 1096 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 BRAFP15056 766 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TAF11Q15544 211 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 PITPNM3Q9BZ71 974 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
PTCH2-201ENST00000372192 CPSF2Q9P2I0 782 aaKnown RBP12.3□□□□□ -0.44
PTCH2-201ENST00000372192 TRIM49P0CI25 452 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 TRIM49CP0CI26 452 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 MYBP10242 640 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 RFX1P22670 979 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 MUM1Q2TAK8 710 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 ANKRD20A8PQ5CZ79 823 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 ANKRD20A3Q5VUR7 823 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 CCDC62Q6P9F0 684 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 GLG1Q92896 1179 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
PTCH2-201ENST00000372192 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 ECT2Q9H8V3 914 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 F8VZ95 297 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 RPS6KA4O75676 772 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 ITGA4P13612 1032 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 NPEPPSP55786 919 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 TRIP13Q15645 432 aaPredicted RBP12.29□□□□□ -0.44
PTCH2-201ENST00000372192 TMC3Q7Z5M5 1100 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
PTCH2-201ENST00000372192 MORC4Q8TE76 937 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 KDM4CQ9H3R0 1056 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 JMJD4Q9H9V9 463 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
PTCH2-201ENST00000372192 DCCP43146 1447 aa12.29□□□□□ -0.44
PTCH2-201ENST00000372192 A0A0A6YYK5 440 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms