RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 RASA1P20936 1047 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 ZKSCAN8Q15776 578 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 MUM1Q2TAK8 710 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 STRIP1Q5VSL9 837 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 KLHL29Q96CT2 875 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 TACO1Q9BSH4 297 aaKnown RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 DDX23Q9BUQ8 820 aaKnown RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 LRRC4Q9HBW1 653 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 RAVER2Q9HCJ3 691 aaKnown RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SLC16A4O15374 487 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 TBXAS1P24557 533 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 PRR5LQ6MZQ0 368 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 HHIPL2Q6UWX4 724 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM193BQ96PV7 902 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SRGAP2BP0DMP2 458 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 PSMD6Q15008 389 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 EDRF1Q3B7T1 1238 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 BZW1Q7L1Q6 419 aaKnown RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 ARMCX2Q7L311 632 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 C7orf31Q8N865 590 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 TC2NQ8N9U0 490 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SPATA4Q8NEY3 305 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 CFAP61Q8NHU2 1237 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 CCDC68Q9H2F9 335 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 EFCC1Q9HA90 598 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 IPO11Q9UI26 975 aaKnown RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 CALB1P05937 261 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 CHRNA3P32297 505 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 STAT3P40763 770 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 DYNLT1P63172 113 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 PPP2R5CQ13362 524 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 TFDP2Q14188 446 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 VPS72Q15906 364 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 TUBB6Q9BUF5 446 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 TIPINQ9BVW5 301 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 DIP2BQ9P265 1576 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 PPP4CP60510 307 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 GPR162Q16538 588 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SNRNP48Q6IEG0 339 aaKnown RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 GBP7Q8N8V2 638 aaPredicted RBP12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 STRIP2Q9ULQ0 834 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
DEPDC1-201ENST00000370966 STXBP3O00186 592 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 ENTPD3O75355 529 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 ACTN1P12814 892 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 OSTNP61366 133 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 STK4Q13043 487 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 BBS9Q3SYG4 887 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 PYROXD1Q8WU10 500 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SCYL1Q96KG9 808 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 CHP1Q99653 195 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SYNJ2BP-COX16A0A087WUM0 186 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 TXNDC9O14530 226 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 CA4P22748 312 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SOX5P35711 763 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SPP2Q13103 211 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 SLC18A3Q16572 532 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 COX16Q9P0S2 106 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 USH1CQ9Y6N9 552 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
DEPDC1-201ENST00000370966 FTLP02792 175 aaPredicted RBP12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 PDHBP11177 359 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 HNRNPH2P55795 449 aaKnown RBP12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 RSRC2Q7L4I2 434 aaKnown RBP12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 HAUS6Q7Z4H7 955 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 LDHDQ86WU2 507 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 BBS5Q8N3I7 341 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.38
DEPDC1-201ENST00000370966 SH3BP5O60239 455 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms