RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
LMO4-201ENST00000370542 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
LMO4-201ENST00000370542 PDIA3P30101 505 aaKnown RBP16.69■□□□□ 0.26
LMO4-201ENST00000370542 CD52P31358 61 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 ZNF76P36508 570 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 BMPR1AP36894 532 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 TIGD5Q53EQ6 642 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 ZNF746Q6NUN9 644 aaPredicted RBP16.69■□□□□ 0.26
LMO4-201ENST00000370542 KIAA0319LQ8IZA0 1049 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
LMO4-201ENST00000370542 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
LMO4-201ENST00000370542 FAM49AQ9H0Q0 323 aaPredicted RBP16.69■□□□□ 0.26
LMO4-201ENST00000370542 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 NUP62CLQ9H1M0 184 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 PADI3Q9ULW8 664 aa16.69■□□□□ 0.26
LMO4-201ENST00000370542 KLRC1P26715 233 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 PTPN5P54829 565 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
LMO4-201ENST00000370542 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
LMO4-201ENST00000370542 MIS18BP1Q6P0N0 1132 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 PHKBQ93100 1093 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 PLVAPQ9BX97 442 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 ZNF302Q9NR11 478 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
LMO4-201ENST00000370542 ZFHX2Q9C0A1 2572 aaPredicted RBP16.68■□□□□ 0.26
LMO4-201ENST00000370542 EVPLQ92817 2033 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 SPTBN4Q9H254 2564 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 ATG2AQ2TAZ0 1938 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 M0QZ92 97 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 KCNA5P22460 613 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 USP11P51784 963 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 KRT76Q01546 638 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 SWSAP1Q6NVH7 229 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 NPAS4Q8IUM7 802 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 CMTR2Q8IYT2 770 aaKnown RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 CCDC148Q8NFR7 591 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 P2RX5Q93086 422 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 PABPC5Q96DU9 382 aaKnown RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 ZNF577Q9BSK1 485 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
LMO4-201ENST00000370542 NSUN3Q9H649 340 aaKnown RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 MYH9P35579 1960 aaKnown RBP16.67■□□□□ 0.26
LMO4-201ENST00000370542 WDR81Q562E7 1941 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 M0R2N6 131 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
LMO4-201ENST00000370542 BACH1O14867 736 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 GFRA3O60609 400 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 C22orf31O95567 290 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 TMEM62Q0P6H9 643 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 CTC1Q2NKJ3 1217 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 PUS10Q3MIT2 529 aaKnown RBP16.66■□□□□ 0.26
LMO4-201ENST00000370542 NAALADL2Q58DX5 795 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 TCEAL5Q5H9L2 206 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 IER5LQ5T953 404 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 PDXDC2PQ6P474 469 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 RBM43Q6ZSC3 357 aaKnown RBP16.66■□□□□ 0.26
LMO4-201ENST00000370542 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
LMO4-201ENST00000370542 LINC01465Q8N7H1 131 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
LMO4-201ENST00000370542 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 PCDHA10Q9Y5I2 948 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 DCHS1Q96JQ0 3298 aa16.66■□□□□ 0.26
LMO4-201ENST00000370542 GRM6O15303 877 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 NCK2O43639 380 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 AK2P54819 239 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
LMO4-201ENST00000370542 TYRO3Q06418 890 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
LMO4-201ENST00000370542 TCF15Q12870 199 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 PAK2Q13177 524 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 CAMK1Q14012 370 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 BTG3Q14201 252 aaPredicted RBP16.65■□□□□ 0.26
LMO4-201ENST00000370542 KRT222Q8N1A0 295 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 TMEM40Q8WWA1 233 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
LMO4-201ENST00000370542 CDHR5Q9HBB8 845 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
LMO4-201ENST00000370542 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 MGEA5O60502 916 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms