RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 LRRC74AQ0VAA2 488 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ABTB2Q8N961 1025 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DNAJB8Q8NHS0 232 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 THAP9Q9H5L6 903 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PA2G4Q9UQ80 394 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GIPC1O14908 333 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 IMPDH2P12268 514 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GRK2P25098 689 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 OTUD4Q01804 1114 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CTTNQ14247 550 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KRT26Q7Z3Y9 468 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GJD3Q8N144 294 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MRPL39Q9NYK5 338 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 LZTS1Q9Y250 596 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 OCRLQ01968 901 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SLC44A4Q53GD3 710 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PRMT9Q6P2P2 845 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ESYT1Q9BSJ8 1104 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PPANQ9NQ55 473 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CEP72Q9P209 647 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RWDD2AQ9UIY3 292 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 IPPQ9Y573 584 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RPS17P08708 135 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KRT3P12035 628 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 H2AFXP16104 143 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GCLCP48506 637 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 STAT4Q14765 748 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 XRRA1Q6P2D8 792 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PIK3C3Q8NEB9 887 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 STARD8Q92502 1023 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 POLR2DO15514 142 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CHRNA3P32297 505 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 NR1H2P55055 460 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 HNRNPH2P55795 449 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PAK1Q13153 545 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SULT6B1Q6IMI4 303 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PRPF31Q8WWY3 499 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DHX36Q9H2U1 1008 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 FLT4P35916 1363 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GUCY1A3Q02108 690 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EIF2B5Q13144 721 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PCBP1Q15365 356 aaKnown RBP eCLIP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KRT73Q86Y46 540 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 FAR1Q8WVX9 515 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EPB41L5Q9HCM4 733 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CTNNA2P26232 953 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SPERTQ8NA61 448 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TOP1MTQ969P6 601 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 USP42Q9H9J4 1324 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 NBPF26B4DH59 902 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 AXIN1O15169 862 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DFNA5O60443 496 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EML3Q32P44 896 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RASIP1Q5U651 963 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KIAA1468Q9P260 1216 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CHORDC1Q9UHD1 332 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PZPP20742 1482 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EFCAB10A6NFE3 127 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RNF135Q8IUD6 432 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SNF8Q96H20 258 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 VTI1BQ9UEU0 232 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SULT1B1O43704 296 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DEXIO95424 95 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RUNX1T1Q06455 604 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EDRF1Q3B7T1 1238 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RABL6Q3YEC7 729 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KRT82Q9NSB4 513 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TTC7AQ9ULT0 858 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ELF1P32519 619 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DNM1Q05193 864 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 NYAP1Q6ZVC0 841 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SLC8A2Q9UPR5 921 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PCDHB13Q9Y5F0 798 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PPIL2Q13356 520 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 NAA35Q5VZE5 725 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TCEAL7Q9BRU2 100 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ZWILCHQ9H900 591 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MTO1Q9Y2Z2 717 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TXNDC9O14530 226 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SNAP91O60641 907 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 FKBP6O75344 327 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TRAP1Q12931 704 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GALNT18Q6P9A2 607 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SKA1Q96BD8 255 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GCOM2Q9BZD3 368 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RMI1Q9H9A7 625 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SUCOQ9UBS9 1254 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CARD8Q9Y2G2 431 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MAPKBP1O60336 1514 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GOLGA8RI6L899 631 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 STX2P32856 288 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ACOT12Q8WYK0 555 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 JDP2Q8WYK2 163 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 STUB1Q9UNE7 303 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SAMM50Q9Y512 469 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 EDC4Q6P2E9 1401 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MAGEB16A2A368 324 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MARK3P27448 753 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CNPY1Q3B7I2 92 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms