RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 PREPLQ4J6C6 727 aaPredicted RBP16.03■□□□□ 0.16
PRKN-204ENST00000366896 CASKIN2Q8WXE0 1202 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 TRAF3IP3Q9Y228 551 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 TBX3O15119 743 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 CETN3O15182 167 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 MED24O75448 989 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.16
PRKN-204ENST00000366896 GUCY2FP51841 1108 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 CASP5P51878 434 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 NEDD9Q14511 834 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 FRMD5Q7Z6J6 570 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 KCTD17Q8N5Z5 321 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 HOOK2Q96ED9 719 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRKN-204ENST00000366896 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 MCM8Q9UJA3 840 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 TMEM59LQ9UK28 342 aa16.02■□□□□ 0.16
PRKN-204ENST00000366896 POTEFA5A3E0 1075 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 ACTN1P12814 892 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 ARSHQ5FYA8 562 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 DCAF15Q66K64 600 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 POTEGQ6S5H5 508 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 POTEEQ6S8J3 1075 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 SLC40A1Q9NP59 571 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 SUFUQ9UMX1 484 aa16.02■□□□□ 0.15
PRKN-204ENST00000366896 E7EVH7 732 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 GH2P01242 217 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 MYBP10242 640 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 HSPA9P38646 679 aaKnown RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 SLC12A3P55017 1021 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 RNASE9P60153 205 aaKnown RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 KLHL30Q0D2K2 578 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 AP3B2Q13367 1082 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ASIC2Q16515 512 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 CDC37Q16543 378 aaPredicted RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 SUPT20HL1Q3ZLR7 823 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 WLSQ5T9L3 541 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 GIMAP7Q8NHV1 300 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ACTR5Q9H9F9 607 aaPredicted RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 TMBIM4Q9HC24 238 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 RAD21O60216 631 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 CAP2P40123 477 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ADAM9Q13443 819 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 IFI16Q16666 785 aaKnown RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 KIAA0753Q2KHM9 967 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 DNAAF5Q86Y56 855 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ARFGAP2Q8N6H7 521 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 C3orf20Q8ND61 904 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
PRKN-204ENST00000366896 CRYGNQ8WXF5 182 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 CYFIP2Q96F07 1278 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 ZNF341Q9BYN7 854 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
PRKN-204ENST00000366896 PRKCIP41743 596 aa16■□□□□ 0.15
PRKN-204ENST00000366896 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
PRKN-204ENST00000366896 KRT12Q99456 494 aa16■□□□□ 0.15
PRKN-204ENST00000366896 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
PRKN-204ENST00000366896 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
PRKN-204ENST00000366896 ZBTB21Q9ULJ3 1066 aa16■□□□□ 0.15
PRKN-204ENST00000366896 PLAAQ9Y263 795 aa16■□□□□ 0.15
PRKN-204ENST00000366896 MYH4Q9Y623 1939 aa16■□□□□ 0.15
PRKN-204ENST00000366896 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
PRKN-204ENST00000366896 TNNC1P63316 161 aa16■□□□□ 0.15
PRKN-204ENST00000366896 KCNH2Q12809 1159 aa16■□□□□ 0.15
PRKN-204ENST00000366896 CEP85LQ5SZL2 805 aa16■□□□□ 0.15
PRKN-204ENST00000366896 LRIG3Q6UXM1 1119 aa16■□□□□ 0.15
PRKN-204ENST00000366896 EPM2AIP1Q7L775 607 aaPredicted RBP16■□□□□ 0.15
PRKN-204ENST00000366896 MKL1Q969V6 931 aa16■□□□□ 0.15
PRKN-204ENST00000366896 PBKQ96KB5 322 aa16■□□□□ 0.15
PRKN-204ENST00000366896 ANO3Q9BYT9 981 aa16■□□□□ 0.15
PRKN-204ENST00000366896 MEIS1O00470 390 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 NR2F2P24468 414 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 PSMC6P62333 389 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 TRADDQ15628 312 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 BMT2Q1RMZ1 405 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 IRF2BP2Q7Z5L9 587 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 USP38Q8NB14 1042 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 CDCA5Q96FF9 252 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 CALR3Q96L12 384 aaKnown RBP15.99■□□□□ 0.15
PRKN-204ENST00000366896 GOLPH3Q9H4A6 298 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 ZNF112Q9UJU3 913 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 FZD1Q9UP38 647 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 BHMG1C9JSJ3 638 aaPredicted RBP15.99■□□□□ 0.15
PRKN-204ENST00000366896 PDXKO00764 312 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 SLC9A1P19634 815 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 ELF1P32519 619 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 CCDC121Q6ZUS5 278 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 SIAH1Q8IUQ4 282 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 DCAF4Q8WV16 495 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
PRKN-204ENST00000366896 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms