RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DEFB115Q30KQ5 88 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 C20orf194Q5TEA3 1177 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 STK11IPQ8N1F8 1099 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 TMEM57Q8N5G2 664 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 KREMEN2Q8NCW0 462 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 PANK1Q8TE04 598 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 SUCLG2Q96I99 432 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 GPR101Q96P66 508 aaPredicted RBP9.58□□□□□ -0.88
YBX3-204ENST00000366290 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
YBX3-204ENST00000366290 ZNF804BA4D1E1 1349 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 WDR33Q9C0J8 1336 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 TMEM82A0PJX8 343 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 BLACEA4D250 179 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 ANKRD62A6NC57 917 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 PLD2O14939 933 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 C6orf222P0C671 652 aaPredicted RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 HSPA8P11142 646 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 ENDOUP21128 410 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 CTCFP49711 727 aaPredicted RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 GYS2P54840 703 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 GP2P55259 537 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 C21orf62-AS1Q17RA5 79 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 EEF1DP3Q658K8 133 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 DENND5AQ6IQ26 1287 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 KSR1Q8IVT5 923 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 AGBL3Q8NEM8 1001 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 NPLOC4Q8TAT6 608 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 FRS2Q8WU20 508 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 BCL7CQ8WUZ0 217 aaPredicted RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 MRPL4Q9BYD3 311 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 COA1Q9GZY4 146 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 BICC1Q9H694 974 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 GPRC5CQ9NQ84 441 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 CNOT7Q9UIV1 285 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 OAS3Q9Y6K5 1087 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
YBX3-204ENST00000366290 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
YBX3-204ENST00000366290 H7C1D1 291 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 TRAF5O00463 557 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 MMP14P50281 582 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 ZNF280AP59817 542 aaPredicted RBP9.56□□□□□ -0.88
YBX3-204ENST00000366290 NTRK3Q16288 839 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 STRIP1Q5VSL9 837 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 ZPBP2Q6X784 338 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 PPIL6Q8IXY8 311 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 CARS2Q9HA77 564 aaKnown RBP9.56□□□□□ -0.88
YBX3-204ENST00000366290 SLC5A6Q9Y289 635 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 RIPOR2Q9Y4F9 1068 aa9.56□□□□□ -0.88
YBX3-204ENST00000366290 FGF10O15520 208 aaPredicted RBP9.55□□□□□ -0.88
YBX3-204ENST00000366290 PRNPP04156 253 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 RPL10P27635 214 aaKnown RBP9.55□□□□□ -0.88
YBX3-204ENST00000366290 FNDC3BQ53EP0 1204 aaKnown RBP9.55□□□□□ -0.88
YBX3-204ENST00000366290 TAF7LQ5H9L4 462 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 USP53Q70EK8 1073 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 MEIS3Q99687 375 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 CLEC1BQ9P126 229 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 MROH5Q6ZUA9 1318 aa9.55□□□□□ -0.88
YBX3-204ENST00000366290 SHTN1A0MZ66 631 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
YBX3-204ENST00000366290 CD8BP10966 210 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 PLS3P13797 630 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 IL1R1P14778 569 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 KLRK1P26718 216 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 RFX5P48382 616 aaPredicted RBP9.54□□□□□ -0.88
YBX3-204ENST00000366290 GABREP78334 506 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.88
YBX3-204ENST00000366290 UBE4AQ14139 1066 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
YBX3-204ENST00000366290 ANGEL2Q5VTE6 544 aaKnown RBP9.54□□□□□ -0.88
YBX3-204ENST00000366290 SPRED2Q7Z698 418 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 WFDC3Q8IUB2 231 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
YBX3-204ENST00000366290 VGLL2Q8N8G2 317 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 SFMBT1Q9UHJ3 866 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 PLAAQ9Y263 795 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 MYO3BQ8WXR4 1341 aa9.54□□□□□ -0.88
YBX3-204ENST00000366290 TAF5LO75529 589 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 RFPL3O75679 317 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 WNT11O96014 354 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 KCNJ4P48050 445 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 TRIM61Q5EBN2 209 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 CYP4F22Q6NT55 531 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 ZNF574Q6ZN55 896 aaPredicted RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 NAT16Q8N8M0 369 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 PTPRN2Q92932 1015 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 NINJ1Q92982 152 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 ABHD8Q96I13 439 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms