RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 THNSL2Q86YJ6 484 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 PHYKPLQ8IUZ5 450 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 CFHR4Q92496 578 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 SAMD11Q96NU1 681 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 SEC61A2Q9H9S3 476 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 SAE1Q9UBE0 346 aaPredicted RBP6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 MSRAQ9UJ68 235 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 CR2P20023 1033 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 ADCY1Q08828 1119 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 MAP3K12Q12852 859 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 STRN3Q13033 797 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 TIGD7Q6NT04 549 aaPredicted RBP6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 PASD1Q8IV76 773 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 OR5AN1Q8NGI8 311 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 Q8TCH9 128 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 OR10A2Q9H208 303 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 DNAI1Q9UI46 699 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 DENND2AQ9ULE3 1009 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 OAZ3Q9UMX2 235 aa6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
RNU4-28P-201ENST00000364739 C2orf78A6NCI8 922 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF623O75123 536 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 LSSP48449 732 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 MASP1P48740 699 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 ADAM17P78536 824 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 DGKDQ16760 1214 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 BROXQ5VW32 411 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 FUKQ8N0W3 1084 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 DYDC2Q96IM9 177 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 OR14A2Q96R54 314 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 DEF6Q9H4E7 631 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 MTG2Q9H4K7 406 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 EMC7Q9NPA0 242 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 KCMF1Q9P0J7 381 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 PUF60Q9UHX1 559 aaKnown RBP6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 CNOT11Q9UKZ1 510 aaKnown RBP6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 MAPRE3Q9UPY8 281 aa6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
RNU4-28P-201ENST00000364739 NEMP1O14524 444 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 PCDH8O95206 1070 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 INSRRP14616 1297 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF20P17024 532 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 CD40P25942 277 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 HGFACQ04756 655 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 NFYCQ13952 458 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 LRRC32Q14392 662 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 TERF2Q15554 542 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZBTB41Q5SVQ8 909 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 KIAA1841Q6NSI8 718 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 DDX46Q7L014 1031 aaKnown RBP6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 PALM2Q8IXS6 379 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 GPR135Q8IZ08 494 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 PLA2G12BQ9BX93 195 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 ANO3Q9BYT9 981 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 SLKQ9H2G2 1235 aaPredicted RBP6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 TMPRSS5Q9H3S3 457 aa6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 AGO3Q9H9G7 860 aaKnown RBP6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
RNU4-28P-201ENST00000364739 BCAR1P56945 870 aa6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 ZXDCQ2QGD7 858 aaPredicted RBP6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 ATP13A4Q4VNC1 1196 aa6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 KLHDC10Q6PID8 442 aa6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 RPGRQ92834 1020 aaKnown RBP6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 USP7Q93009 1102 aa6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 NKD2Q969F2 451 aaPredicted RBP6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 TMEM176AQ96HP8 235 aa6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 RPL10LQ96L21 214 aaKnown RBP6.46□□□□□ -1.38
RNU4-28P-201ENST00000364739 A0A0A6YYK5 440 aaPredicted RBP6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 PRSS38A1L453 326 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 OPHN1O60890 802 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 MAFO75444 373 aaPredicted RBP6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 CLEC2LP0C7M8 214 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 BPIP17213 487 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 LSP1P33241 339 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 DUSP8Q13202 625 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 SAFB2Q14151 953 aaKnown RBP eCLIP6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 DDB1Q16531 1140 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 C11orf74Q86VG3 221 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 ZNF610Q8N9Z0 462 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 SLC5A5Q92911 643 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 GPR20Q99678 358 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 KLC2Q9H0B6 622 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 USP18Q9UMW8 372 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 MYPNQ86TC9 1320 aa6.45□□□□□ -1.38
RNU4-28P-201ENST00000364739 A0A0A6YYJ9 748 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 H2AFYO75367 372 aaKnown RBP6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 ADCY7P51828 1080 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 OCRLQ01968 901 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 CDSNQ15517 529 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 ESPNLQ6ZVH7 1005 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms