RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TATDN1Q6P1N9 297 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 KIAA0825Q8IV33 1275 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 MREGQ8N565 214 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 ZSWIM2Q8NEG5 633 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 SLC35G2Q8TBE7 412 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■□□ 14.9
SMC3-201ENST00000361804 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
SMC3-201ENST00000361804 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 GOLGA6L10A6NI86 522 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 DNM1LO00429 736 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 TGFB1I1O43294 461 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
SMC3-201ENST00000361804 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 TPH2Q8IWU9 490 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 DBNDD1Q9H9R9 158 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 MSH4O15457 936 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 CAND2O75155 1236 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 CHRNA5P30532 468 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
SMC3-201ENST00000361804 HYIQ5T013 277 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 CCDC13Q8IYE1 715 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 SLC20A1Q8WUM9 679 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 ALG3Q92685 438 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 FAM84AQ96KN4 292 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 LRRC27Q9C0I9 530 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 THAP2Q9H0W7 228 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
SMC3-201ENST00000361804 PLCB1Q9NQ66 1216 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 SLC12A6Q9UHW9 1150 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 GGT7Q9UJ14 662 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 COG5Q9UP83 839 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 MMP10P09238 476 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 PDE4CQ08493 712 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 TMC3Q7Z5M5 1100 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 RAPGEF5Q92565 580 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 SNX24Q9Y343 169 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 GNA14O95837 355 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 CALCAP01258 141 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 BYSLQ13895 437 aaKnown RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 DRAP1Q14919 205 aaPredicted RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 BTBD6Q96KE9 485 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 WRAP73Q9P2S5 460 aaPredicted RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMC3-201ENST00000361804 PLTPP55058 493 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 CCDC38Q502W7 563 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 RUBCNQ92622 972 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 KRT35Q92764 455 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 ZDHHC15Q96MV8 337 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 COA1Q9GZY4 146 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 ARID2Q68CP9 1835 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 FAM107AO95990 144 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
SMC3-201ENST00000361804 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 STXBP5LQ9Y2K9 1186 aa11.5□□□□□ -0.57
SMC3-201ENST00000361804 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 TCRBV7S2A1N4TA0A589 114 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 FLOT1O75955 427 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 JAM2P57087 298 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 DLG4P78352 724 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 EDRF1Q3B7T1 1238 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 CD302Q8IX05 232 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 ZDHHC14Q8IZN3 488 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 CNPY4Q8N129 248 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 KAT5Q92993 513 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 HAUS2Q9NVX0 235 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 KRT13P13646 458 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 IFI35P80217 286 aaPredicted RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
SMC3-201ENST00000361804 ZC3H3Q8IXZ2 948 aaKnown RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 POP1Q99575 1024 aaKnown RBP11.49□□□□□ -0.57
SMC3-201ENST00000361804 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 GMNCA6NCL1 334 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 F8VZ95 297 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms