RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-202ENST00000360620 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-202ENST00000360620 BRAFP15056 766 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 CTTNQ14247 550 aaKnown RBP12.92□□□□□ -0.34
EPHB4-202ENST00000360620 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 NSMFQ6X4W1 530 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 C3orf20Q8ND61 904 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 GLIS3Q8NEA6 775 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 PITPNM3Q9BZ71 974 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-202ENST00000360620 ANAPC5Q9UJX4 755 aa12.92□□□□□ -0.34
EPHB4-202ENST00000360620 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
EPHB4-202ENST00000360620 DIAPH2O60879 1101 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 AGTP01019 485 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 SOX5P35711 763 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 STRN3Q13033 797 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ZNF571Q7Z3V5 609 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TTYH3Q9C0H2 523 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 BLOC1S4Q9NUP1 217 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 THRAP3Q9Y2W1 955 aaKnown RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 FTLP02792 175 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TNFRSF8P28908 595 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 UBXN2AP68543 259 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ANKRD20A8PQ5CZ79 823 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 AP1ARQ63HQ0 302 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ADGRF4Q8IZF3 695 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 BAP1Q92560 729 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TXLNGQ9NUQ3 528 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 H0Y3Z8 333 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ARHGAP4P98171 946 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 ICA1Q05084 483 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 CCDC62Q6P9F0 684 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 PPP1R21Q6ZMI0 780 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 TRIM59Q8IWR1 403 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
EPHB4-202ENST00000360620 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
EPHB4-202ENST00000360620 PDXKO00764 312 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 RWDD2BP57060 319 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 NPY5RQ15761 445 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 ZYXQ15942 572 aaKnown RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 FNBP1Q96RU3 617 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 SALL4Q9UJQ4 1053 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 SLIT3O75094 1523 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 TRAPPC3O43617 180 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 MAPK4P31152 587 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 SNAP25P60880 206 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 MREGQ8N565 214 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 PABPC3Q9H361 631 aaKnown RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 FGFR1OP2Q9NVK5 253 aa12.9□□□□□ -0.34
EPHB4-202ENST00000360620 TPX2Q9ULW0 747 aaKnown RBP12.9□□□□□ -0.34
EPHB4-202ENST00000360620 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.35
EPHB4-202ENST00000360620 MXI1P50539 228 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 GPC5P78333 572 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 CERKLQ49MI3 558 aaPredicted RBP12.9□□□□□ -0.35
EPHB4-202ENST00000360620 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.35
EPHB4-202ENST00000360620 INPP4AQ96PE3 977 aaPredicted RBP12.9□□□□□ -0.35
EPHB4-202ENST00000360620 REEP2Q9BRK0 252 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 BCS1LQ9Y276 419 aa12.9□□□□□ -0.35
EPHB4-202ENST00000360620 USP15Q9Y4E8 981 aaPredicted RBP12.9□□□□□ -0.35
EPHB4-202ENST00000360620 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 F8VZ95 297 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SMIM24O75264 130 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms