RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 SRRM1Q8IYB3 904 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 SERPINI1Q99574 410 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 C3P01024 1663 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 ACTN1P12814 892 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 ARL4AP40617 200 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 DARS2Q6PI48 645 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 OATP04181 439 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 FKBP1AP62942 108 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 PDCLQ13371 301 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 PCGF5Q86SE9 256 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 PRPF31Q8WWY3 499 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 YIPF3Q9GZM5 350 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 RAD17O75943 681 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 BBS5Q8N3I7 341 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 RAD54LQ92698 747 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
DNMT1-202ENST00000359526 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 TJP3O95049 919 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 ESRRGP62508 458 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PRKG1Q13976 671 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 GRM4Q14833 912 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 STXBP2Q15833 593 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 BZW1Q7L1Q6 419 aaKnown RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 KCTD6Q8NC69 237 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 UBN2Q6ZU65 1347 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 GPSM2P81274 684 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 RAPH1Q70E73 1250 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 LY9Q9HBG7 655 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 ZBTB5O15062 677 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 RFX1P22670 979 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 MARCH10Q8NA82 808 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 XAB2Q9HCS7 855 aaKnown RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 CLRN2A0PK11 232 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 MEIS1O00470 390 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 S100BP04271 92 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 MMEP08473 750 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 SLC16A2P36021 539 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 GGCXP38435 758 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PRCPP42785 496 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PLCB4Q15147 1175 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PYROXD1Q8WU10 500 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 PACSIN2Q9UNF0 486 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-202ENST00000359526 NEDD4P46934 1319 aa13.09□□□□□ -0.31
DNMT1-202ENST00000359526 FAM187AA6NFU0 413 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 CA4P22748 312 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.31
DNMT1-202ENST00000359526 FOXO4P98177 505 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 DEUP1Q05D60 604 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 ITKQ08881 620 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 DONSONQ9NYP3 566 aa13.08□□□□□ -0.31
DNMT1-202ENST00000359526 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 SLC25A27O95847 323 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 PLS3P13797 630 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 GPC5P78333 572 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 TMED1Q13445 227 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 OSBPL9Q96SU4 736 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 SLITRK6Q9H5Y7 841 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 DNAJC12Q9UKB3 198 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 KCNH4Q9UQ05 1017 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 LRRC53A6NM62 1247 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 MX2P20592 715 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 NUGGCQ68CJ6 796 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 PRPSAP2O60256 369 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 GGPS1O95749 300 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms