RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 POLR3FQ9H1D9 316 aaPredicted RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 GPRC5CQ9NQ84 441 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 PDLIM7Q9NR12 457 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 HIP1RO75146 1068 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 RPLP2P05387 115 aaKnown RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 DRP2Q13474 957 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 IER5Q5VY09 327 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 KIFAP3Q92845 792 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 HTATIP2Q9BUP3 242 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 TRIM9Q9C026 710 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 SCN5AQ14524 2016 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 FAM13AO94988 1023 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 VTNP04004 478 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 ASIC1P78348 528 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
TPM1-206ENST00000358278 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 KIAA0319LQ8IZA0 1049 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 LINC01465Q8N7H1 131 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 SCLT1Q96NL6 688 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 POLD4Q9HCU8 107 aa16.89■□□□□ 0.29
TPM1-206ENST00000358278 CEP290O15078 2479 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 M0QZ92 97 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 MYL1P05976 194 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 CLTBP09497 229 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 IDEP14735 1019 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 CASP1P29466 404 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 THPOP40225 353 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 GIT2Q14161 759 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
TPM1-206ENST00000358278 POSTNQ15063 836 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 PRPF31Q8WWY3 499 aaKnown RBP16.88■□□□□ 0.29
TPM1-206ENST00000358278 WNT8BQ93098 351 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 COL4A3BPQ9Y5P4 624 aa16.88■□□□□ 0.29
TPM1-206ENST00000358278 GTPBP6O43824 516 aaPredicted RBP16.87■□□□□ 0.29
TPM1-206ENST00000358278 BFSP2Q13515 415 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 CUL4BQ13620 913 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 SH3RF1Q7Z6J0 888 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 NME8Q8N427 588 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 DHX38Q92620 1227 aaKnown RBP16.87■□□□□ 0.29
TPM1-206ENST00000358278 DNAJC19Q96DA6 116 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 IFT74Q96LB3 600 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 C7orf25Q9BPX7 421 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 PARVGQ9HBI0 331 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
TPM1-206ENST00000358278 TMEM39AQ9NV64 488 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 CTSHP09668 335 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 ARL2P36404 184 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 LAMTOR4Q0VGL1 99 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 MAPK7Q13164 816 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 DMP1Q13316 513 aaPredicted RBP16.87■□□□□ 0.29
TPM1-206ENST00000358278 PNOCQ13519 176 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 DAW1Q8N136 415 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 NLRP7Q8WX94 980 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 NLRP4Q96MN2 994 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
TPM1-206ENST00000358278 GINS2Q9Y248 185 aa16.87■□□□□ 0.29
TPM1-206ENST00000358278 ASAP2O43150 1006 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 CAND2O75155 1236 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 CKBP12277 381 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 GLRA2P23416 452 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 NLRP11P59045 1033 aaKnown RBP16.86■□□□□ 0.29
TPM1-206ENST00000358278 MRPS6P82932 125 aaKnown RBP16.86■□□□□ 0.29
TPM1-206ENST00000358278 TFDP1Q14186 410 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 PPP2R5AQ15172 486 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 CAMK4Q16566 473 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 KIZQ2M2Z5 673 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 RPAINQ86UA6 219 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 KSR1Q8IVT5 923 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 MYCT1Q8N699 235 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 ASAP3Q8TDY4 903 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 ZNF668Q96K58 619 aaPredicted RBP16.86■□□□□ 0.29
TPM1-206ENST00000358278 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 C17orf75Q9HAS0 396 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
TPM1-206ENST00000358278 LTBP2Q14767 1821 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 LRRIQ4A6NIV6 560 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
TPM1-206ENST00000358278 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 PLS3P13797 630 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 GPC3P51654 580 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 PEX3P56589 373 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms