RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SLC7A6OSQ96CW6 309 aaPredicted RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 EYA1Q99502 592 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 SLITRK6Q9H5Y7 841 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 AIPL1Q9NZN9 384 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 TRIM75PA6NK02 468 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 ZCCHC18P0CG32 403 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 ADARP55265 1226 aaKnown RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 KHDC1Q4VXA5 237 aaKnown RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 TTI2Q6NXR4 508 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 NEK9Q8TD19 979 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 NAP1L3Q99457 506 aaPredicted RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 TMEM109Q9BVC6 243 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 ZMYND12Q9H0C1 365 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 DDX47Q9H0S4 455 aaKnown RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 STMN4Q9H169 189 aaPredicted RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 MYLK2Q9H1R3 596 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
RTN3-205ENST00000356000 PASKQ96RG2 1323 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 SSU72P8A0A1W2PR75 194 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 EPHB2P29323 1055 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 AP1B1Q10567 949 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 CGB2Q6NT52 195 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 TAOK1Q7L7X3 1001 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 EFR3BQ9Y2G0 817 aa16.97■□□□□ 0.31
RTN3-205ENST00000356000 TRAFD1O14545 582 aaPredicted RBP16.96■□□□□ 0.31
RTN3-205ENST00000356000 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
RTN3-205ENST00000356000 WDR72Q3MJ13 1102 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 DENND2CQ68D51 928 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 VSIG1Q86XK7 387 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 PPFIBP2Q8ND30 876 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 SNRNP27Q8WVK2 155 aaKnown RBP16.96■□□□□ 0.31
RTN3-205ENST00000356000 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 TUBGCP5Q96RT8 1024 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.31
RTN3-205ENST00000356000 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 ZNF148Q9UQR1 794 aa16.96■□□□□ 0.31
RTN3-205ENST00000356000 RGL2O15211 777 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.3
RTN3-205ENST00000356000 SLC34A1Q06495 639 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 CLPPQ16740 277 aaPredicted RBP16.96■□□□□ 0.3
RTN3-205ENST00000356000 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 NME8Q8N427 588 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 MPP4Q96JB8 637 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 ZNF184Q99676 751 aaPredicted RBP16.96■□□□□ 0.3
RTN3-205ENST00000356000 TLE6Q9H808 572 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 AMACRQ9UHK6 382 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 R3HDM2Q9Y2K5 976 aaKnown RBP16.96■□□□□ 0.3
RTN3-205ENST00000356000 STK24Q9Y6E0 443 aa16.96■□□□□ 0.3
RTN3-205ENST00000356000 A6NJR5 290 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 KCNK3O14649 394 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 HGSO14964 777 aaPredicted RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 BIRC5O15392 142 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 TROVE2P10155 538 aaKnown RBP eCLIP16.95■□□□□ 0.3
RTN3-205ENST00000356000 MYL6BP14649 208 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 TARSP26639 723 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 RFX5P48382 616 aaPredicted RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 PMS2P54278 862 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 HDAC4P56524 1084 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 LRRC14Q15048 493 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 INTS8Q75QN2 995 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 MAP7D3Q8IWC1 876 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 CKAP2Q8WWK9 683 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 AP1M1Q9BXS5 423 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 CNOT7Q9UIV1 285 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 UTP11Q9Y3A2 253 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 LTN1O94822 1766 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 HTR3EA5X5Y0 456 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 ZNF213O14771 459 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 ASMTLO95671 621 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 IFNAR1P17181 557 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 RPS6KA1Q15418 735 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 TMEM53Q6P2H8 277 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 CYB5R4Q7L1T6 521 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 OXER1Q8TDS5 423 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 MAML3Q96JK9 1138 aa16.95■□□□□ 0.3
RTN3-205ENST00000356000 DUSP9Q99956 384 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 NOC4LQ9BVI4 516 aaKnown RBP16.95■□□□□ 0.3
RTN3-205ENST00000356000 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 PGRMC1O00264 195 aaKnown RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 EPHB6O15197 1021 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 TTI1O43156 1089 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 KLRC1P26715 233 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 SERPINB3P29508 390 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 RASSF2P50749 326 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 MYBPC2Q14324 1141 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 RCN1Q15293 331 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 C4orf50Q6ZRC1 276 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 SDR16C5Q8N3Y7 309 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 418.8 ms