RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TOGARAM2Q6ZUX3 1019 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 ANO5Q75V66 913 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 ICA1LQ8NDH6 482 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 MAGEB5Q9BZ81 275 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 ADA2Q9NZK5 511 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 RESTQ13127 1097 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 OLFM3Q96PB7 478 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 SERPINB13Q9UIV8 391 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 MOSPD1Q9UJG1 213 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 CHUKO15111 745 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 CALB1P05937 261 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 GPC5P78333 572 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 PATL1Q86TB9 770 aaKnown RBP15.87■□□□□ 0.13
LMX1B-201ENST00000355497 KCNV2Q8TDN2 545 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 HEMGNQ9BXL5 484 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 ECT2Q9H8V3 914 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 GOLGA8MH3BSY2 632 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 NLRP4Q96MN2 994 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 NDE1Q9NXR1 346 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 ARHGAP10A1A4S6 786 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 PRKAB2O43741 272 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 GGCXP38435 758 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 RECQLP46063 649 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-201ENST00000355497 TCOF1Q13428 1488 aaKnown RBP15.87■□□□□ 0.13
LMX1B-201ENST00000355497 CCDC159P0C7I6 412 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 JAK3P52333 1124 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 PEX3P56589 373 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 MRPS25P82663 173 aaKnown RBP15.87■□□□□ 0.13
LMX1B-201ENST00000355497 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 TAGAPQ8N103 731 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 HPCAL4Q9UM19 191 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 UBN2Q6ZU65 1347 aa15.87■□□□□ 0.13
LMX1B-201ENST00000355497 OCM2P0CE71 109 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 OCMP0CE72 109 aaPredicted RBP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 MAGOHP61326 146 aaKnown RBP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 ZRANB2O95218 330 aaKnown RBP eCLIP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 ARFIP2P53365 341 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 GYS2P54840 703 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 PPP2R2AP63151 447 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 CCNYL1Q8N7R7 359 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 TEKT4Q8WW24 435 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 FAM161BQ96MY7 647 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 WBP4O75554 376 aaKnown RBP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 MARK3P27448 753 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 CRKLP46109 303 aaKnown RBP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 RBBP7Q16576 425 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 RESP18Q5W5W9 173 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 UNC5CLQ8IV45 518 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 TTLL11Q8NHH1 800 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 TGS1Q96RS0 853 aaKnown RBP15.86■□□□□ 0.13
LMX1B-201ENST00000355497 DIAPH2O60879 1101 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 ARHGAP18Q8N392 663 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 TMEM35BQ8NCS4 154 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 EPAS1Q99814 870 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 ARHGAP26Q9UNA1 814 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 C1orf228Q6PIY5 440 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 HEY1Q9Y5J3 304 aa15.86■□□□□ 0.13
LMX1B-201ENST00000355497 E5RI56 91 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 PMS1P54277 932 aaKnown RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 UNC13DQ70J99 1090 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 ATP6V0A4Q9HBG4 840 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 RNF123Q5XPI4 1314 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 GMNCA6NCL1 334 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 CUL4AQ13619 759 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 ACBD5Q5T8D3 534 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 LRRC31Q6UY01 552 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 DNAJC6O75061 913 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 MYO1DO94832 1006 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 KRT8P05787 483 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 POU5F1BQ06416 359 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 GRID2IPA4D2P6 1211 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 SYNDIG1LA6NDD5 238 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 MYO1CO00159 1063 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 MAFGO15525 162 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 CCDC85BQ15834 202 aaPredicted RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 PDCD6IPQ8WUM4 868 aaKnown RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 PUS7LQ9H0K6 701 aaKnown RBP15.85■□□□□ 0.13
LMX1B-201ENST00000355497 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 KIAA1586Q9HCI6 787 aa15.85■□□□□ 0.13
LMX1B-201ENST00000355497 UBE4BO95155 1302 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 CCDC92Q53HC0 331 aaPredicted RBP15.84■□□□□ 0.13
LMX1B-201ENST00000355497 CATSPER3Q86XQ3 398 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 STX19Q8N4C7 294 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 TTC30BQ8N4P2 665 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 USP6NLQ92738 828 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 DYNLL2Q96FJ2 89 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 PI4KBQ9UBF8 816 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 DCTN4Q9UJW0 460 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms