RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM221A6NGB7 291 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 A6NJR5 290 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 CAPN9O14815 690 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 ECE2O60344 883 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 SUPT3HO75486 399 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 NOL4O94818 638 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 ASLP04424 464 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 HNRNPCP07910 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
IFT88-202ENST00000351808 ZNF24P17028 368 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 TATP17735 454 aaPredicted RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 MCAMP43121 646 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 MFSD4BQ5TF39 518 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 RASGEF1CQ8N431 466 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 AGBL1Q96MI9 1066 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 LRRC37BQ96QE4 947 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
IFT88-202ENST00000351808 CNOT7Q9UIV1 285 aaKnown RBP14.28□□□□□ -0.12
IFT88-202ENST00000351808 ITGA2BP08514 1039 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 STX2P32856 288 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 PRPF4BQ13523 1007 aaKnown RBP14.27□□□□□ -0.12
IFT88-202ENST00000351808 KPNB1Q14974 876 aaKnown RBP14.27□□□□□ -0.12
IFT88-202ENST00000351808 MTFR1Q15390 333 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 KBTBD2Q8IY47 623 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 SLC35B4Q969S0 331 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 STRBPQ96SI9 672 aaKnown RBP14.27□□□□□ -0.12
IFT88-202ENST00000351808 PITPNM3Q9BZ71 974 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.12
IFT88-202ENST00000351808 RXRBP28702 533 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 NEK3P51956 506 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 POLGP54098 1239 aaPredicted RBP14.27□□□□□ -0.13
IFT88-202ENST00000351808 PLOD1Q02809 727 aaPredicted RBP14.27□□□□□ -0.13
IFT88-202ENST00000351808 ADCY1Q08828 1119 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 C4orf32Q8N8J7 132 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 KIAA0895Q8NCT3 520 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.13
IFT88-202ENST00000351808 MAFGO15525 162 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 TBX10O75333 385 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 PCCAP05165 728 aaPredicted RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 MARK3P27448 753 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 ACVR2BQ13705 512 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 CROCCP2Q86T23 111 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 PPFIBP2Q8ND30 876 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 TPCN2Q8NHX9 752 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 ESR2Q92731 530 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 CLMNQ96JQ2 1002 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 LSM14BQ9BX40 385 aaKnown RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 EDEM3Q9BZQ6 932 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 TRIM9Q9C026 710 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 CEP72Q9P209 647 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 RIPK2O43353 540 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 CENPPQ6IPU0 288 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 DUS1LQ6P1R4 473 aaKnown RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 HS2ST1Q7LGA3 356 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
IFT88-202ENST00000351808 CENPKQ9BS16 269 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 TMEM109Q9BVC6 243 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 TUBGCP4Q9UGJ1 667 aa14.26□□□□□ -0.13
IFT88-202ENST00000351808 FAM196BA6NMK8 535 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 SLC34A1Q06495 639 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 FUT2Q10981 343 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 ZRSR2Q15696 482 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 LRP10Q7Z4F1 713 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 CCDC85AQ96PX6 553 aaPredicted RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 AIPL1Q9NZN9 384 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 ARHGAP23Q9P227 1491 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 A0A0J9YVX5 310 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 TECPR2O15040 1411 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 VIL1P09327 827 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 TTLL12Q14166 644 aaPredicted RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 ACSBG2Q5FVE4 666 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 SPATA24Q86W54 205 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 RIBC1Q8N443 379 aaPredicted RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 DNAJC1Q96KC8 554 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 ASCC2Q9H1I8 757 aaPredicted RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 LARSQ9P2J5 1176 aaKnown RBP14.25□□□□□ -0.13
IFT88-202ENST00000351808 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
IFT88-202ENST00000351808 MAP3K7O43318 606 aa14.24□□□□□ -0.13
IFT88-202ENST00000351808 EYA4O95677 639 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms