RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HGSNATQ68CP4 663 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 GADL1Q6ZQY3 521 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 RRAGAQ7L523 313 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 FASTKD5Q7L8L6 764 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 HS2ST1Q7LGA3 356 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 ARMC9Q7Z3E5 817 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 KSR1Q8IVT5 923 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SPIRE2Q8WWL2 714 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TSC1Q92574 1164 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 HVCN1Q96D96 273 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 FGD4Q96M96 766 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 DRC1Q96MC2 740 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 ACCSQ96QU6 501 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 IRX2Q9BZI1 471 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 IKZF4Q9H2S9 585 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TMEM206Q9H813 350 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 C17orf75Q9HAS0 396 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TXNRD2Q9NNW7 524 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SIX2Q9NPC8 291 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 LZTFL1Q9NQ48 299 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 AIPL1Q9NZN9 384 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 GABBR1Q9UBS5 961 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SLC9A2Q9UBY0 812 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TCEAL9Q9UHQ7 104 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 MYO6Q9UM54 1294 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TELO2Q9Y4R8 837 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 COL11A1P12107 1806 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 PTPRFP10586 1907 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 SYNGAP1Q96PV0 1343 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 LOC102724159A0A0B4J2E5 919 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 POTEB2H3BUK9 544 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 K7ENM7 598 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PEX10O60683 326 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PLEKP08567 350 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 ERCC3P19447 782 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 ATP4AP20648 1035 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PON1P27169 355 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 EIF4A3P38919 411 aaKnown RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 VAV2P52735 878 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 NCBP1Q09161 790 aaKnown RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PWP2Q15269 919 aaKnown RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 ARHGAP29Q52LW3 1261 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 XKR3Q5GH77 459 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 UTP14CQ5TAP6 766 aaKnown RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 KLHDC7AQ5VTJ3 777 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PLA2G4FQ68DD2 849 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 SWSAP1Q6NVH7 229 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 MIS18BP1Q6P0N0 1132 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 OTUD6AQ7L8S5 288 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 HAUS6Q7Z4H7 955 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC60Q8IWA6 550 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 FAM186BQ8IYM0 893 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 ANKRD35Q8N283 1001 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 TMEM161BQ8NDZ6 487 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 SHCBP1Q8NEM2 672 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 MORC4Q8TE76 937 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 KIFAP3Q92845 792 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 OPTNQ96CV9 577 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 CEP89Q96ST8 783 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 R3HDMLQ9H3Y0 253 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 NMRK2Q9NPI5 230 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 GPRC5CQ9NQ84 441 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 XPNPEP1Q9NQW7 623 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 DAAM1Q9Y4D1 1078 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 MRFAP1Q9Y605 127 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 POLR2AP24928 1970 aaKnown RBP7.58□□□□□ -1.2
TRIM55-203ENST00000350034 LCTP09848 1927 aa7.58□□□□□ -1.2
TRIM55-203ENST00000350034 LOXHD1Q8IVV2 1947 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 GSTTP1A0A1W2PQM5 241 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 RCCD1A6NED2 376 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 PMM2O15305 246 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 PJA2O43164 708 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 TADA3O75528 432 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 DGAT1O75907 488 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 URI1O94763 535 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 SERPING1P05155 500 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 TGFB3P10600 412 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 UCHL3P15374 230 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 SLC9A1P19634 815 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 OSBPP22059 807 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 PRKCIP41743 596 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 NPTX2P47972 431 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 KIF11P52732 1056 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 PEX3P56589 373 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 JAM2P57087 298 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 POLR2FP61218 127 aaKnown RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 AMPD2Q01433 879 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 APBA1Q02410 837 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 ENPEPQ07075 957 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 EXOC3L4Q17RC7 722 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 Q3C1V9 767 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms