RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TRIM47Q96LD4 638 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 PHF12Q96QT6 1004 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 KLHL14Q9P2G3 628 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 MAGEC2Q9UBF1 373 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 SPATA31A1Q5TZJ5 1347 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CBX6O95503 412 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 BCRP11274 1271 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 GIT2Q14161 759 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 DEPTORQ8TB45 409 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 NEURL1BA8MQ27 555 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 KRT38O76015 456 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 PLCG2P16885 1265 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 CDK7P50613 346 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 EIF3BP55884 814 aaKnown RBP11.48□□□□□ -0.57
CAPN3-203ENST00000349748 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 KPNB1Q14974 876 aaKnown RBP11.48□□□□□ -0.57
CAPN3-203ENST00000349748 RILPL1Q5EBL4 403 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 WASHC2DQ5SRD0 308 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 EIF1ADQ8N9N8 165 aaKnown RBP11.48□□□□□ -0.57
CAPN3-203ENST00000349748 PGM2Q96G03 612 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 TRIM51Q9BSJ1 452 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 MIS12Q9H081 205 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
CAPN3-203ENST00000349748 MYH2Q9UKX2 1941 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 MRC1P22897 1456 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 ATP9BO43861 1147 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 TBX10O75333 385 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 ASMTLO95671 621 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 GH1P01241 217 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 IGBP1P78318 339 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 INTS8Q75QN2 995 aaKnown RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 MARK2Q7KZI7 788 aaKnown RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 HS2ST1Q7LGA3 356 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SLC7A6OSQ96CW6 309 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 FOXP2O15409 715 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 MMP1P03956 469 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 ERFP50548 548 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SLC29A2Q14542 456 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 NTRK3Q16288 839 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 KLC3Q6P597 504 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 RRAGAQ7L523 313 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SATL1Q86VE3 508 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 FMO2Q99518 471 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-203ENST00000349748 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 KRT82Q9NSB4 513 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 PAG1Q9NWQ8 432 aa11.47□□□□□ -0.57
CAPN3-203ENST00000349748 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 LRRC53A6NM62 1247 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 WNT7AO00755 349 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 FGAP02671 866 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 XBP1P17861 261 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 YY1P25490 414 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 KLRC1P26715 233 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 GRIA2P42262 883 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 PSMD7P51665 324 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 GCKRQ14397 625 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 ZCWPW2Q504Y3 356 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 DENND2CQ68D51 928 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 SLC2A7Q6PXP3 512 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 TREML1Q86YW5 311 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 NCOA7Q8NI08 942 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 OSBP2Q969R2 916 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 CRAMP1Q96RY5 1269 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 ZNF184Q99676 751 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 MYD88Q99836 296 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 ABCA3Q99758 1704 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 IPO5O00410 1097 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 SPTLC1O15269 473 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 PJA2O43164 708 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 COL6A2P12110 1019 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 CCR3P51677 355 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 LRRC8BQ6P9F7 803 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 APOA5Q6Q788 366 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms