RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ERVK-5Q9HDB9 667 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 SH3GLB2Q9NR46 395 aa10.96□□□□□ -0.65
MRPL55-204ENST00000348259 CNTNAP5Q8WYK1 1306 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 IGKV6D-21A0A0A0MT36 114 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 C9IYK1 514 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 PER2O15055 1255 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 ATG7O95352 703 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 PLEKHA8P1O95397 391 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 YEATS4O95619 227 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 STAG3L1P0CL83 205 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 NBL1P41271 181 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 NASPP49321 788 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 FOXK2Q01167 660 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 PFKFB3Q16875 520 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 FOXD4L6Q3SYB3 417 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 IER5Q5VY09 327 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 FOXD4L3Q6VB84 417 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 RBM23Q86U06 439 aaKnown RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 CDHR1Q96JP9 859 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 AIFM3Q96NN9 605 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 CELF4Q9BZC1 486 aaKnown RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 TLE6Q9H808 572 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 RNF19AQ9NV58 838 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
MRPL55-204ENST00000348259 MORC2Q9Y6X9 1032 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 V9GY48 417 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-204ENST00000348259 MYH9P35579 1960 aaKnown RBP10.94□□□□□ -0.66
MRPL55-204ENST00000348259 FSD2A1L4K1 749 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 MAFGO15525 162 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 PPFIA3O75145 1194 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-204ENST00000348259 FGF18O76093 207 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 ZNF445P59923 1031 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 FAM189BP81408 668 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 TMEM62Q0P6H9 643 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 DSC3Q14574 896 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 PDE12Q6L8Q7 609 aaKnown RBP10.94□□□□□ -0.66
MRPL55-204ENST00000348259 ANKRD54Q6NXT1 300 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 PLPPR4Q7Z2D5 763 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 COLGALT1Q8NBJ5 622 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 IRF2BPLQ9H1B7 796 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 GDPD2Q9HCC8 539 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 JADE2Q9NQC1 790 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
MRPL55-204ENST00000348259 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
MRPL55-204ENST00000348259 NFASCO94856 1347 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 PRR23AA6NEV1 266 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 LETM1O95202 739 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-204ENST00000348259 IGBP1P78318 339 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 PAK2Q13177 524 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 MTMR1Q13613 665 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 GALNT17Q6IS24 598 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 MTHFD1LQ6UB35 978 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 NOSTRINQ8IVI9 506 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 CMTR1Q8N1G2 835 aaKnown RBP10.93□□□□□ -0.66
MRPL55-204ENST00000348259 NME8Q8N427 588 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 TMEM105Q8N8V8 129 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 KCNG4Q8TDN1 519 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 GLG1Q92896 1179 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 GJB4Q9NTQ9 266 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 CDH22Q9UJ99 828 aa10.93□□□□□ -0.66
MRPL55-204ENST00000348259 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
MRPL55-204ENST00000348259 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-204ENST00000348259 KMT2BQ9UMN6 2715 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-204ENST00000348259 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 C2orf16Q68DN1 1984 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 HIDE1A8MVS5 230 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 H0Y858 1186 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 hCG_1984214I3L0E3 225 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-204ENST00000348259 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 RILPL1Q5EBL4 403 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 CAVIN1Q6NZI2 390 aaKnown RBP10.92□□□□□ -0.66
MRPL55-204ENST00000348259 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
MRPL55-204ENST00000348259 KIAA0319LQ8IZA0 1049 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 ZNF713Q8N859 430 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-204ENST00000348259 LINC00301Q8NCQ3 95 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
MRPL55-204ENST00000348259 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms