RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CYB5R4Q7L1T6 521 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 NME8Q8N427 588 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 MDM1Q8TC05 714 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 IGDCC4Q8TDY8 1250 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 GFM2Q969S9 779 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 ZNF333Q96JL9 665 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 RUNDC3BQ96NL0 473 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 HAPLN3Q96S86 360 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 SMC6Q96SB8 1091 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 MPHOSPH6Q99547 160 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 USP40Q9NVE5 1235 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 RASAL2Q9UJF2 1139 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 PAIP2BQ9ULR5 123 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 GDAQ9Y2T3 454 aa8.79□□□□□ -1
ATG4A-201ENST00000343524 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.79□□□□□ -1
ATG4A-201ENST00000343524 PALM3A6NDB9 673 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 TRIM49BA6NDI0 452 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 A8MUI8 341 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 DCDC2CA8MYV0 355 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 ECE2O60344 883 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 E2F6O75461 281 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 DCTN3O75935 186 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 RPL13P26373 211 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 PTDSS1P48651 473 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 USP11P51784 963 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 PMS2P54278 862 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 NR5A1Q13285 461 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 ASTE1Q2TB18 679 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 MFSD5Q6N075 450 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 CCDC174Q6PII3 467 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 BICDL1Q6ZP65 573 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 KCPQ6ZWJ8 1503 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 SYCE1Q8N0S2 351 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 KIF2BQ8N4N8 673 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 LRRC8CQ8TDW0 803 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 C17orf50Q8WW18 174 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 TXLNGYQ9BZA5 131 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 ROPN1BQ9BZX4 212 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 RMI1Q9H9A7 625 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 ROPN1Q9HAT0 212 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 RRAGCQ9HB90 399 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 TNRC6CQ9HCJ0 1690 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 NDUFA13Q9P0J0 144 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 MTRF1LQ9UGC7 380 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 ARFGEF2Q9Y6D5 1785 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 FAM187AA6NFU0 413 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 LRRC53A6NM62 1247 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 KRIT1O00522 736 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 KCNK3O14649 394 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 TJP3O95049 919 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 ECEL1O95672 775 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 FTCDO95954 541 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 IDO1P14902 403 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 RXRAP19793 462 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 SLC1A4P43007 532 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 SULT2A1Q06520 285 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 EHHADHQ08426 723 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 RCN2Q14257 317 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 RASA3Q14644 834 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 CNGA2Q16280 664 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 MAN2A1Q16706 1144 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 USH1GQ495M9 461 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 VWA3BQ502W6 1294 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 CCDC92Q53HC0 331 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 MIIPQ5JXC2 388 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 RASIP1Q5U651 963 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 KLC3Q6P597 504 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 UNC13DQ70J99 1090 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 CRACR2BQ8N4Y2 399 aaPredicted RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 IRGQQ8WZA9 623 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 METTL14Q9HCE5 456 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 USP20Q9Y2K6 914 aa8.78□□□□□ -1
ATG4A-201ENST00000343524 NOC2LQ9Y3T9 749 aaKnown RBP8.78□□□□□ -1
ATG4A-201ENST00000343524 MYH6P13533 1939 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 A0A1B0GVG6 124 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 CYP27B1O15528 508 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 DAPK3O43293 454 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PLEKP08567 350 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-201ENST00000343524 ANXA13P27216 316 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 LBX1P52954 281 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 DHX34Q14147 1143 aaKnown RBP8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 DAB2IPQ5VWQ8 1189 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 RRAGAQ7L523 313 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 VSIG1Q86XK7 387 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 TBC1D10CQ8IV04 446 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 RASGEF1CQ8N431 466 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PPP2R3CQ969Q6 453 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 HIC2Q96JB3 615 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 MYD88Q99836 296 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PHF20Q9BVI0 1012 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 SPATA16Q9BXB7 569 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 ADAM33Q9BZ11 813 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PPP1R12CQ9BZL4 782 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms