RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 RNF40O75150 1001 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 IL1R1P14778 569 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 LMNB2Q03252 620 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 RASSF4Q9H2L5 321 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 SMARCAD1Q9H4L7 1026 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 MAP1SQ66K74 1059 aaPredicted RBP16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 PROM2Q8N271 834 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 HINFPQ9BQA5 517 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 BPIFA3Q9BQP9 254 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 TUFT1Q9NNX1 390 aa16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 CPSF3Q9UKF6 684 aaKnown RBP16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 PDS5AQ29RF7 1337 aaKnown RBP16.23■□□□□ 0.19
PCDHB13-201ENST00000341948 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 GPC3P51654 580 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 LLGL1Q15334 1064 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 MMP14P50281 582 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 SCFD2Q8WU76 684 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 SAAL1Q96ER3 474 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 GCNAQ96QF7 691 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 LGALS16A8MUM7 142 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 STXBP3O00186 592 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 MOCS3O95396 460 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 ARL4AP40617 200 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 ZNF131P52739 623 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 GNGT1P63211 74 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 C4orf50Q6ZRC1 276 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 PCDHA13Q9Y5I0 950 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 SH3BP5O60239 455 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 FTCDO95954 541 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 CCNYQ8ND76 341 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
PCDHB13-201ENST00000341948 HEXIM1O94992 359 aaKnown RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ERICH1Q86X53 443 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 SCN4BQ8IWT1 228 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 UHMK1Q8TAS1 419 aaKnown RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 IL25Q9H293 177 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 FAM114A2Q9NRY5 505 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 DAAM1Q9Y4D1 1078 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 XPAP23025 273 aaPredicted RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 BACE1P56817 501 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ATP11AP98196 1134 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 MAP3K14Q99558 947 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 CALN1Q9BXU9 219 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ADAMTS1Q9UHI8 967 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 GMNNO75496 209 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 DGAT1O75907 488 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 CAPN12Q6ZSI9 719 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 CCDC13Q8IYE1 715 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 CTSHP09668 335 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 EFNA5P52803 228 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 ALKBH5Q6P6C2 394 aaKnown RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 SHC4Q6S5L8 630 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 RYBPQ8N488 228 aaPredicted RBP16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 MCUR1Q96AQ8 359 aa16.21■□□□□ 0.19
PCDHB13-201ENST00000341948 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 ATP1A2P50993 1020 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 KCNH2Q12809 1159 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 GNASQ5JWF2 1037 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 SPATA24Q86W54 205 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 GPATCH11Q8N954 259 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 KATNAL1Q9BW62 490 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 RARBP10826 455 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 ZNF18P17022 549 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 HSPA6P17066 643 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 CASP7P55210 303 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 TSPY1Q01534 308 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 GKAP1Q5VSY0 366 aaPredicted RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 PBKQ96KB5 322 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 PTPN22Q9Y2R2 807 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 TBX3O15119 743 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 PRPSAP2O60256 369 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 CXCR5P32302 372 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 VAMP7P51809 220 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 EPHB4P54760 987 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 TROAPQ12815 778 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 SF3A3Q12874 501 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 NAALADL2Q58DX5 795 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 SDCCAG8Q86SQ7 713 aaPredicted RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 GUF1Q8N442 669 aaKnown RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 TMEM143Q96AN5 459 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
PCDHB13-201ENST00000341948 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
PCDHB13-201ENST00000341948 ARID5BQ14865 1188 aa16.19■□□□□ 0.18
PCDHB13-201ENST00000341948 EPB41L5Q9HCM4 733 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms