RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SMC1BQ8NDV3 1235 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 PBKQ96KB5 322 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 CTDNEP1O95476 244 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 HSPA6P17066 643 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 GUCY2DQ02846 1103 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 SGO2Q562F6 1265 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 RIT2Q99578 217 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 TMEM35BQ8NCS4 154 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 SLC4A9Q96Q91 983 aa21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 AGO2Q9UKV8 859 aaKnown RBP21.1■□□□□ 0.97
SEMA6C-201ENST00000341697 DYNC1LI2O43237 492 aaPredicted RBP21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 TBXAS1P24557 533 aaPredicted RBP21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 METTL16Q86W50 562 aaKnown RBP21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 ACER1Q8TDN7 264 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 CALN1Q9BXU9 219 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 FAM205AQ6ZU69 1335 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 KCTD6Q8NC69 237 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 PTPN22Q9Y2R2 807 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 PDXKO00764 312 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 PSMC4P43686 418 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 KYAT1Q16773 422 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 SMAP1Q8IYB5 467 aaPredicted RBP21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 VPS33BQ9H267 617 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 I3L4J1 428 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 MCF2LO15068 1137 aa21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 RBAKQ9NYW8 714 aaPredicted RBP21.09■□□□□ 0.97
SEMA6C-201ENST00000341697 HOXA10P31260 410 aaPredicted RBP21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 EPHX2P34913 555 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 TMEM270Q6UE05 265 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 URGCPQ8TCY9 931 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 KCND2Q9NZV8 630 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 NDUFAB1O14561 156 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 ICAM1P05362 532 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 CDC42EP1Q00587 391 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 ADGRA1Q86SQ6 560 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 CCNYQ8ND76 341 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 KCNB2Q92953 911 aa21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 SUCLA2Q9P2R7 463 aaPredicted RBP21.08■□□□□ 0.97
SEMA6C-201ENST00000341697 CYP2B6P20813 491 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 NMT1P30419 496 aaKnown RBP21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 NBPF9Q3BBW0 867 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 CEP85LQ5SZL2 805 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 LRRD1A4D1F6 860 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 AP3M2P53677 418 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 PPP2R3BQ9Y5P8 575 aa21.08■□□□□ 0.96
SEMA6C-201ENST00000341697 UBE2Q2LH0YL09 131 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 PFDN6O15212 129 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 CSPG5O95196 566 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 GTF2A2P52657 109 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 ERO1BQ86YB8 467 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 C7orf25Q9BPX7 421 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 DAAM1Q9Y4D1 1078 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 LRRC53A6NM62 1247 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 ECE1P42892 770 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 ABHD10Q9NUJ1 306 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 FBXO28Q9NVF7 368 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 CPSF3Q9UKF6 684 aaKnown RBP21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 MAD1L1Q9Y6D9 718 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 KIAA0391O15091 583 aaKnown RBP21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 SREBF2Q12772 1141 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 PPP2R5CQ13362 524 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 RABGGTAQ92696 567 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 KATNAL1Q9BW62 490 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 FAM114A2Q9NRY5 505 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 RPS6P62753 249 aaKnown RBP21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 ELMSAN1Q6PJG2 1045 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 DAGLBQ8NCG7 672 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 SCFD2Q8WU76 684 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 INTS2Q9H0H0 1204 aaKnown RBP21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
SEMA6C-201ENST00000341697 DDTLA6NHG4 134 aaPredicted RBP21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 PRKCBP05771 671 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 BACE1P56817 501 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 FRMD5Q7Z6J6 570 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 NPHP3-ACAD11A0A0J9YXS1 232 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 ARL13BQ3SXY8 428 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 CAPN12Q6ZSI9 719 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 FAM83AQ86UY5 434 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 TTC39CQ8N584 583 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 VPS52Q8N1B4 723 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 C6orf222P0C671 652 aaPredicted RBP21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 SRGAP2BP0DMP2 458 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 HOMER3Q9NSC5 361 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 ECEL1O95672 775 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 DYNLT1P63172 113 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 TSPY1Q01534 308 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 MICAL1Q8TDZ2 1067 aa21.06■□□□□ 0.96
SEMA6C-201ENST00000341697 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 BIRC2Q13490 618 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 SALL3Q9BXA9 1300 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 TCRBV5S4A2TA0A5A2 114 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 MAGEB2O15479 319 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 CXCR5P32302 372 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 SNX1Q13596 522 aa21.05■□□□□ 0.96
SEMA6C-201ENST00000341697 DUOXA2Q1HG44 320 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms