RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 VSIG10LQ86VR7 867 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 CNGA4Q8IV77 575 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 GBP3Q9H0R5 595 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 SOWAHBA6NEL2 793 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 N4BP3O15049 544 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 TBX3O15119 743 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 DHX15O43143 795 aaKnown RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 GHRHRQ02643 423 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 SEPT14Q6ZU15 432 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 DDX12PQ92771 950 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 SPDL1Q96EA4 605 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 GPBP1L1Q9HC44 474 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
BRAT1-201ENST00000340611 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
BRAT1-201ENST00000340611 HTTP42858 3142 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 GOLGA6CA6NDK9 693 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 NDUFAB1O14561 156 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 SRGAP2O75044 1071 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 GOLGA6DP0CG33 693 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 CAPZA3Q96KX2 299 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 CHP1Q99653 195 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 CAPS2Q9BXY5 557 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 SLC39A2Q9NP94 309 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 GOLGA6AQ9NYA3 693 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 SLITRK3O94933 977 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 PLA2G4BP0C869 781 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 CETPP11597 493 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
BRAT1-201ENST00000340611 STK4Q13043 487 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 LRRC41Q15345 812 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 FGFBP2Q9BYJ0 223 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 ABHD10Q9NUJ1 306 aa16.48■□□□□ 0.23
BRAT1-201ENST00000340611 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 RTN2O75298 545 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 CDC25CP30307 473 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 PRCPP42785 496 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 GTF2A2P52657 109 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 SP2Q02086 613 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 PDE4DQ08499 809 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 GRIK3Q13003 919 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 KRT31Q15323 416 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 CCDC26Q8TAB7 109 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 SH3GL3Q99963 347 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 TACO1Q9BSH4 297 aaKnown RBP16.47■□□□□ 0.23
BRAT1-201ENST00000340611 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 G3BP2Q9UN86 482 aaKnown RBP16.47■□□□□ 0.23
BRAT1-201ENST00000340611 MICAL1Q8TDZ2 1067 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 TEKT3Q9BXF9 490 aa16.47■□□□□ 0.23
BRAT1-201ENST00000340611 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
BRAT1-201ENST00000340611 SFI1A8K8P3 1242 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 ZEB2O60315 1214 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 CCNE2O96020 404 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 CCND2P30279 289 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 KRT9P35527 623 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 PMS1P54277 932 aaKnown RBP16.46■□□□□ 0.23
BRAT1-201ENST00000340611 AMPD2Q01433 879 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 TUBB2AQ13885 445 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 MB21D1Q8N884 522 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 TUBB2BQ9BVA1 445 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 FRMPD4Q14CM0 1322 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
BRAT1-201ENST00000340611 RPA1P27694 616 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 CDR1P51861 262 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 STIM1Q13586 685 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 UGCGQ16739 394 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 ARSHQ5FYA8 562 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 MMS19Q96T76 1030 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
BRAT1-201ENST00000340611 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 RSPH10BP0C881 870 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.22
BRAT1-201ENST00000340611 CTAGE1Q96RT6 745 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 PYM1Q9BRP8 204 aaKnown RBP16.46■□□□□ 0.22
BRAT1-201ENST00000340611 CRACR2AQ9BSW2 395 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 CPA4Q9UI42 421 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.22
BRAT1-201ENST00000340611 RBAK-RBAKDNI3L0D1 243 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 IPO7O95373 1038 aaKnown RBP16.45■□□□□ 0.22
BRAT1-201ENST00000340611 PPP2R5CQ13362 524 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
BRAT1-201ENST00000340611 MIER3Q7Z3K6 550 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms