RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TRIM5Q9C035 493 aa7.91□□□□□ -1.14
NUP43-201ENST00000340413 FANCLQ9NW38 375 aa7.91□□□□□ -1.14
NUP43-201ENST00000340413 ARHGAP28Q9P2N2 729 aa7.91□□□□□ -1.14
NUP43-201ENST00000340413 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
NUP43-201ENST00000340413 BIN1O00499 593 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 ZEB2O60315 1214 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 MSCO60682 206 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 CAND2O75155 1236 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 ZNF865P0CJ78 1059 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 TXNP10599 105 aaKnown RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 COPB1P53618 953 aaKnown RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 SP2Q02086 613 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 DMP1Q13316 513 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 ZPBP2Q6X784 338 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 SFR1Q86XK3 245 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 CCDC60Q8IWA6 550 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 FAM178BQ8IXR5 827 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 CSGALNACT2Q8N6G5 542 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 PANX2Q96RD6 677 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 SEMA6BQ9H3T3 888 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 GDAQ9Y2T3 454 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 HAS3O00219 553 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 ZNF862O60290 1169 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 AP3M2P53677 418 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 UBASH3AP57075 661 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 LACTBP83111 547 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 XKR9Q5GH70 373 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 HS2ST1Q7LGA3 356 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 APBB1IPQ7Z5R6 666 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 ZNF410Q86VK4 478 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 DAW1Q8N136 415 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 SYN2Q92777 582 aaPredicted RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.14
NUP43-201ENST00000340413 SAMM50Q9Y512 469 aa7.9□□□□□ -1.14
NUP43-201ENST00000340413 BACH1O14867 736 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 DUSP11O75319 330 aaKnown RBP7.9□□□□□ -1.15
NUP43-201ENST00000340413 CABYRO75952 493 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 AKR1A1P14550 325 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 GJA9P57773 515 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 CRHR2Q13324 411 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 EMC2Q15006 297 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 DGKDQ16760 1214 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 SWSAP1Q6NVH7 229 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 CAPNS2Q96L46 248 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 FBXL18Q96ME1 805 aa7.9□□□□□ -1.15
NUP43-201ENST00000340413 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 CHMP2AO43633 222 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 LDHAP00338 332 aaKnown RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 TPM1P09493 284 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 TCF7P36402 384 aaPredicted RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 PLCB4Q15147 1175 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 SURF1Q15526 300 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 UGCGQ16739 394 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 SPECC1LQ69YQ0 1117 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 ANKRD40Q6AI12 368 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 SAMD1Q6SPF0 538 aaPredicted RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 SEPT14Q6ZU15 432 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 IRF2BP1Q8IU81 584 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 NME8Q8N427 588 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 TMC2Q8TDI7 906 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 ZNF526Q8TF50 670 aaPredicted RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 CEP170P1Q96L14 293 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 PRIMPOLQ96LW4 560 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 TSEN34Q9BSV6 310 aaKnown RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 MRPL44Q9H9J2 332 aaKnown RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 PLCB1Q9NQ66 1216 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 SERPINC1P01008 464 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 MMP3P08254 477 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 FKBP15Q5T1M5 1219 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 CNGA4Q8IV77 575 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 MYCT1Q8N699 235 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 RNF214Q8ND24 703 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 GBP3Q9H0R5 595 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 F2P00734 622 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 CYBAP13498 195 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 IDEP14735 1019 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 ATP4AP20648 1035 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 CDK11BP21127 795 aaKnown RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 CYP4A11Q02928 519 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 KRT31Q15323 416 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 MAP3K21Q5TCX8 1036 aa7.89□□□□□ -1.15
NUP43-201ENST00000340413 TRIM44Q96DX7 344 aaPredicted RBP7.89□□□□□ -1.15
NUP43-201ENST00000340413 TNPO2O14787 897 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 EPB41P11171 864 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 HNRNPH3P31942 346 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 PSMC2P35998 433 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 TNFAIP2Q03169 654 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 VWA3BQ502W6 1294 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 ODR4Q5SWX8 454 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 ZNF662Q6ZS27 426 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 TMEM161BQ8NDZ6 487 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 BORCS6Q96GS4 357 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 CNOT6LQ96LI5 555 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms