RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 PRPF18Q99633 342 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 POLD4Q9HCU8 107 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 FAM153AQ9UHL3 310 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 ITGA2BP08514 1039 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 S100A5P33763 92 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 HAND2P61296 217 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 CAV1Q03135 178 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 TUBGCP2Q9BSJ2 902 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 PARVGQ9HBI0 331 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 TBK1Q9UHD2 729 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 ASMTLO95671 621 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 TRMT5Q32P41 509 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 HEATR4Q86WZ0 1026 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 KCNK16Q96T55 309 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 PIK3R4Q99570 1358 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 NAP1L4Q99733 375 aaKnown RBP13.48□□□□□ -0.25
BRPF3-201ENST00000339717 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
BRPF3-201ENST00000339717 M0R3G1 203 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 MAEAQ7L5Y9 396 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 EFHD2Q96C19 240 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 WWP1Q9H0M0 922 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 PFDN6O15212 129 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 FAM58BPP0C7Q3 252 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 IST1P53990 364 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 LRRC63Q05C16 580 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 LPIN1Q14693 890 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 MTF1Q14872 753 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 RBM43Q6ZSC3 357 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 SRRM1Q8IYB3 904 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 SMG5Q9UPR3 1016 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 DMTF1Q9Y222 760 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 MTO1Q9Y2Z2 717 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 AK5Q9Y6K8 562 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 REREQ9P2R6 1566 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 TARSP26639 723 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 RECQLP46063 649 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 LMBRD2Q68DH5 695 aaPredicted RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 EHD4Q9H223 541 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 CHEK2O96017 543 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 MT-ND3P03897 115 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 ACTN1P12814 892 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 EIF4A3P38919 411 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
BRPF3-201ENST00000339717 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 ANAPC5Q9UJX4 755 aa13.47□□□□□ -0.25
BRPF3-201ENST00000339717 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 MYL6BP14649 208 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
BRPF3-201ENST00000339717 TBCCQ15814 346 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 SEPT1Q8WYJ6 367 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 ABCC4O15439 1325 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 IDO1P14902 403 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 TTKP33981 857 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 IL12RB1P42701 662 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 SV2BQ7L1I2 683 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 LRRC49Q8IUZ0 686 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 AENQ8WTP8 325 aaKnown RBP13.46□□□□□ -0.25
BRPF3-201ENST00000339717 ZC3H15Q8WU90 426 aaKnown RBP13.46□□□□□ -0.25
BRPF3-201ENST00000339717 NAT14Q8WUY8 206 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 GOLPH3LQ9H4A5 285 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 MOSPD1Q9UJG1 213 aa13.46□□□□□ -0.25
BRPF3-201ENST00000339717 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.26
BRPF3-201ENST00000339717 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.26
BRPF3-201ENST00000339717 RFX8Q6ZV50 586 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 MB21D1Q8N884 522 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 JADE3Q92613 823 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 PICK1Q9NRD5 415 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 DEXIO95424 95 aa13.46□□□□□ -0.26
BRPF3-201ENST00000339717 PTPRN2Q92932 1015 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms