RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LGALS16A8MUM7 142 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 DNAJC6O75061 913 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 SERPINB7O75635 380 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 PCSK6P29122 969 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 TNNC1P63316 161 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 PDE1CQ14123 709 aaPredicted RBP10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 STKLD1Q8NE28 680 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 U2AF1L4Q8WU68 220 aaKnown RBP10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 CASP10Q92851 521 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 INPP4AQ96PE3 977 aaPredicted RBP10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 HEPHQ9BQS7 1158 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 MKNK1Q9BUB5 465 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 LRMDAQ9H2I8 198 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 MKS1Q9NXB0 559 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 SELENONQ9NZV5 590 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 NOX1Q9Y5S8 564 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 PASKQ96RG2 1323 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 FBP2O00757 339 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 MAP3K7O43318 606 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 GJB6O95452 261 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 PRLRP16471 622 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 YY1P25490 414 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ARPC4P59998 168 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 EIF4A2Q14240 407 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 KIF22Q14807 665 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 CYTH1Q15438 398 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 RBM44Q6ZP01 1051 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 USP38Q8NB14 1042 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ATP6V0A1Q93050 837 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 SLC7A6OSQ96CW6 309 aaPredicted RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ZMAT2Q96NC0 199 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ZNF184Q99676 751 aaPredicted RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 DCLRE1BQ9H816 532 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 KCNK9Q9NPC2 374 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 TRPV5Q9NQA5 729 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ZNF148Q9UQR1 794 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 GNAT3A8MTJ3 354 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 ENDOUP21128 410 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 CMTR1Q8N1G2 835 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 MIPEPQ99797 713 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 EPB41L4BQ9H329 900 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 KLHL14Q9P2G3 628 aa10.39□□□□□ -0.75
PTCHD4-201ENST00000339488 SEMA3EO15041 775 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 RGL2O15211 777 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 ZNF862O60290 1169 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.755e-9■■■■■ 40.8
PTCHD4-201ENST00000339488 EEF2P13639 858 aaKnown RBP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 FGFR4P22455 802 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 PTPREP23469 700 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 MZF1P28698 734 aaPredicted RBP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 GUCY1A2P33402 732 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 CDK17Q00537 523 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 FAM209AQ5JX71 171 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 METTL21CQ5VZV1 264 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 SH3TC2Q8TF17 1288 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 ALDH2P05091 517 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 MYBP10242 640 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 PRCPP42785 496 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 PMS2P54278 862 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 OCRLQ01968 901 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 SLC29A2Q14542 456 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 PAOXQ6QHF9 649 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 ANO5Q75V66 913 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 RNF169Q8NCN4 708 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 PPP2R3CQ969Q6 453 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 CEP44Q9C0F1 390 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 CHKBQ9Y259 395 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
PTCHD4-201ENST00000339488 MYPNQ86TC9 1320 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 A6NL46 340 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 STAMBPO95630 424 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 T-ENOLP0DO92 83 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 TMED10P49755 219 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 NEK2P51955 445 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 SEPT7Q16181 437 aaKnown RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 ANKDD1AQ495B1 522 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 ST13P4Q8IZP2 240 aaPredicted RBP10.37□□□□□ -0.75
PTCHD4-201ENST00000339488 ZNF507Q8TCN5 953 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms