RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.62□□□□□ -0.23
DFFB-202ENST00000339350 COL22A1Q8NFW1 1626 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 MYMKA6NI61 221 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 ABLIM1O14639 778 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 FLOT1O75955 427 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 GSTA1P08263 222 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 KRT16P08779 473 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 CCNG1P51959 295 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 IFI16Q16666 785 aaKnown RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 HAUS3Q68CZ6 603 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 BARGINQ6ZT62 677 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 CACNA2D4Q7Z3S7 1137 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 FNBP4Q8N3X1 1017 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 IWS1Q96ST2 819 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 ATP8A2Q9NTI2 1148 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 PAIP2BQ9ULR5 123 aaKnown RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 LSM1O15116 133 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 CARSP49589 748 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 PLOD1Q02809 727 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 VWA3BQ502W6 1294 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 ZNF394Q53GI3 561 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 MMGT1Q8N4V1 131 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 BARX2Q9UMQ3 279 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 TMCC1O94876 653 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 MYCLP1P12525 358 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 GRM4Q14833 912 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 MIGA2Q7L4E1 593 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 EXOC3L1Q86VI1 746 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 ZBTB8BQ8NAP8 495 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 UCMAQ8WVF2 138 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 CLIP3Q96DZ5 547 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 PIGSQ96S52 555 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 PLAAQ9Y263 795 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 DLEC1Q9Y238 1755 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 FRMPD2Q68DX3 1309 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 PCNTO95613 3336 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 GLI1P08151 1106 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 FLT3P36888 993 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 OR2W6PQ8NHA6 318 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 COA7Q96BR5 231 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 IFT43Q96FT9 208 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 NKX1-2Q9UD57 310 aaPredicted RBP13.61□□□□□ -0.23
DFFB-202ENST00000339350 CHMP2BQ9UQN3 213 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 ATP8A1Q9Y2Q0 1164 aa13.61□□□□□ -0.23
DFFB-202ENST00000339350 TDP2O95551 362 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 RFC4P35249 363 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 TRPC1P48995 793 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
DFFB-202ENST00000339350 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 NCCRP1Q6ZVX7 275 aaPredicted RBP13.6□□□□□ -0.23
DFFB-202ENST00000339350 KCNK18Q7Z418 384 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 TRAPPC9Q96Q05 1148 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 VCXQ9H320 206 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 LRRC42Q9Y546 428 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 RAD21O60216 631 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
DFFB-202ENST00000339350 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 ATP6V1C1P21283 382 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 SERPINB4P48594 390 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 NCALDP61601 193 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 GUCY2DQ02846 1103 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 CLEC10AQ8IUN9 316 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 NELFCDQ8IXH7 590 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 ANKS4BQ8N8V4 417 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
DFFB-202ENST00000339350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
DFFB-202ENST00000339350 TLR10Q9BXR5 811 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 ABCF3Q9NUQ8 709 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 USH1CQ9Y6N9 552 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
DFFB-202ENST00000339350 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 SLC37A4O43826 429 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 PCP11498 1178 aaKnown RBP13.59□□□□□ -0.23
DFFB-202ENST00000339350 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms