RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 PDXKO00764 312 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 N4BP3O15049 544 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 PRKCZQ05513 592 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 NR1I3Q14994 352 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 HAUS6Q7Z4H7 955 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 FILIP1Q7Z7B0 1213 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 PES1O00541 588 aaKnown RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 RFC5P40937 340 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 NPTX2P47972 431 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 ADAM9Q13443 819 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 IRF5Q13568 498 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 SYCP3Q8IZU3 236 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 BSNDQ8WZ55 320 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 STRA6Q9BX79 667 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 IKZF4Q9H2S9 585 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 C17orf75Q9HAS0 396 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 KMT5AQ9NQR1 393 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 TYW1Q9NV66 732 aaKnown RBP16.18■□□□□ 0.18
CBX3-201ENST00000337620 TRAF3IP3Q9Y228 551 aa16.18■□□□□ 0.18
CBX3-201ENST00000337620 UBE4BO95155 1302 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 TEX33O43247 280 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 PPP1R37O75864 691 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 MMP3P08254 477 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 PRKCSHP14314 528 aaPredicted RBP16.17■□□□□ 0.18
CBX3-201ENST00000337620 NCKAP1LP55160 1127 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 CAP1Q01518 475 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 DGKDQ16760 1214 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 TUBGCP2Q9BSJ2 902 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
CBX3-201ENST00000337620 FAM184BQ9ULE4 1060 aa16.17■□□□□ 0.18
CBX3-201ENST00000337620 GNEQ9Y223 722 aaKnown RBP16.17■□□□□ 0.18
CBX3-201ENST00000337620 CETN3O15182 167 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 CLIC2O15247 247 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 TGFB1I1O43294 461 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 HBP1O60381 514 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 MAFO75444 373 aaPredicted RBP16.16■□□□□ 0.18
CBX3-201ENST00000337620 IGHA2P01877 340 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 NR2F2P24468 414 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 ALCAMQ13740 583 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 SLC17A8Q8NDX2 589 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 CFHR5Q9BXR6 569 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 SUGCTQ9HAC7 445 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 ZMYM2Q9UBW7 1377 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 TPM2P07951 284 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 RTP1P59025 263 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 VSTM4Q8IW00 320 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 TRAPPC12Q8WVT3 735 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 SPIRE2Q8WWL2 714 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 TRIB2Q92519 343 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
CBX3-201ENST00000337620 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 CENPFP49454 3210 aa16.16■□□□□ 0.18
CBX3-201ENST00000337620 H3BRB1 525 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 NR3C1P04150 777 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 IGBP1P78318 339 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 GTF2BQ00403 316 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 CCDC40Q4G0X9 1142 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 HS2ST1Q7LGA3 356 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 TMEM161BQ8NDZ6 487 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
CBX3-201ENST00000337620 NTPCRQ9BSD7 190 aaKnown RBP16.15■□□□□ 0.18
CBX3-201ENST00000337620 ST6GALNAC4Q9H4F1 302 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 TUT1Q9H6E5 874 aaKnown RBP16.15■□□□□ 0.18
CBX3-201ENST00000337620 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 RPL13P26373 211 aaKnown RBP16.15■□□□□ 0.18
CBX3-201ENST00000337620 ARL2P36404 184 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 UBXN1Q04323 297 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 EXOC8Q8IYI6 725 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 ASAP3Q8TDY4 903 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
CBX3-201ENST00000337620 AP5M1Q9H0R1 490 aa16.15■□□□□ 0.18
CBX3-201ENST00000337620 A6NJR5 290 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 INSRRP14616 1297 aa16.14■□□□□ 0.17
CBX3-201ENST00000337620 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms