RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 F5H6K3 240 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 DCTN3O75935 186 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 BRAFP15056 766 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 PSMA2P25787 234 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 KLRC3Q07444 240 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 MCPH1Q8NEM0 835 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 RBM41Q96IZ5 413 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 LRGUKQ96M69 825 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 SEL1LQ9UBV2 794 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 MAGED2Q9UNF1 606 aaPredicted RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 NOC2LQ9Y3T9 749 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 GOLGA8QA0A0J9YX86 632 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 GOLGA8OA6NCC3 632 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 GOLGA8NF8WBI6 632 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 CTIFO43310 598 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 SRGNP10124 158 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 STAT3P40763 770 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 CRKP46108 304 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 MTMR1Q13613 665 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 HEXIM2Q96MH2 286 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 EPS15L1Q9UBC2 864 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 FBXL5Q9UKA1 691 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 PALM3A6NDB9 673 aaPredicted RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 PFDN6O15212 129 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 NPR1P16066 1061 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 THNSL1Q8IYQ7 743 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 ADGRF4Q8IZF3 695 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 ZNF564Q8TBZ8 553 aaPredicted RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 TTC17Q96AE7 1141 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 DDX27Q96GQ7 796 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 RPS6KC1Q96S38 1066 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 TRIM55Q9BYV6 548 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 SNX25Q9H3E2 840 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 IPO11Q9UI26 975 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 UNC13BO14795 1591 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 TRIM49P0CI25 452 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 TRIM49CP0CI26 452 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 BAG6P46379 1132 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 VAMP7P51809 220 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 ARL4CP56559 192 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 STK4Q13043 487 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 PDIA5Q14554 519 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 RFFLQ8WZ73 363 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 RMDN3Q96TC7 470 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
RTN4-202ENST00000337526 ITIH6Q6UXX5 1313 aa14.73□□□□□ -0.05
RTN4-202ENST00000337526 SLC16A4O15374 487 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 TRIM59Q8IWR1 403 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 SYT2Q8N9I0 419 aaPredicted RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 HVCN1Q96D96 273 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 LRRC4Q9HBW1 653 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 TTC7AQ9ULT0 858 aaPredicted RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 CYP2C19P33261 490 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 CAV1Q03135 178 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 ATG16L1Q676U5 607 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 EPM2AIP1Q7L775 607 aaPredicted RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 NSUN4Q96CB9 384 aaKnown RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 PLA2G12BQ9BX93 195 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 TDRD3Q9H7E2 651 aaKnown RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 INTUQ9ULD6 942 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 FAM187AA6NFU0 413 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 TTC4O95801 387 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 SRGAP2BP0DMP2 458 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 USP11P51784 963 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 GUCY1A3Q02108 690 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 CDO1Q16878 200 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 TMEM270Q6UE05 265 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 PASD1Q8IV76 773 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 VIPAS39Q9H9C1 493 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 KIAA1586Q9HCI6 787 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 G3BP2Q9UN86 482 aaKnown RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 WDR64B1ANS9 1081 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 H0Y3Z8 333 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 RHOBTB3O94955 611 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 OATP04181 439 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 JAK3P52333 1124 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 STX1BP61266 288 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 MYO1EQ12965 1108 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 NR1H3Q13133 447 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 ZNF667Q5HYK9 610 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 CCDC137Q6PK04 289 aaKnown RBP14.72□□□□□ -0.05
RTN4-202ENST00000337526 NLRP4Q96MN2 994 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 NUP85Q9BW27 656 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 BAG5Q9UL15 447 aa14.72□□□□□ -0.05
RTN4-202ENST00000337526 SPDYE16A6NNV3 312 aaPredicted RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 CLDN3O15551 220 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 MAP3K7O43318 606 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 PPP1R37O75864 691 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 KRT3P12035 628 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 ZNF18P17022 549 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 NCF2P19878 526 aaPredicted RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 TMPRSS15P98073 1019 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms