RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MORC3Q14149 939 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 HS1BP3Q53T59 392 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 HYIQ5T013 277 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 HAUS3Q68CZ6 603 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 HERVK_113Q902F9 699 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 CDK5RAP3Q96JB5 506 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 KBTBD4Q9NVX7 518 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 SAMM50Q9Y512 469 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 TMEM150BA6NC51 233 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 CHRNA1P02708 482 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 PSAPP07602 524 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 MUTP22033 750 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 PPP1R2P41236 205 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 Q7L0L9 218 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 RSPH10B2B2RC85 870 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 CXCL10P02778 98 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 RSPH10BP0C881 870 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 GNAT1P11488 350 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 ERCC5P28715 1186 aaPredicted RBP18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 SPIRE1Q08AE8 756 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 KCNB1Q14721 858 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 FAM160B1Q5W0V3 765 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 PSRC1Q6PGN9 363 aaPredicted RBP18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 RPUSD2Q8IZ73 545 aaKnown RBP18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 SH2D3AQ9BRG2 576 aa18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 WRAP73Q9P2S5 460 aaPredicted RBP18.26■□□□□ 0.51
PDLIM1-201ENST00000329399 WDR81Q562E7 1941 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 KLRC1P26715 233 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 PBX2P40425 430 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 CNNM4Q6P4Q7 775 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 SARM1Q6SZW1 724 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 MTHFD1LQ6UB35 978 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 MIER3Q7Z3K6 550 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 TMCO2Q7Z6W1 182 aaPredicted RBP18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 FAM49AQ9H0Q0 323 aaPredicted RBP18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 MAN1B1Q9UKM7 699 aa18.25■□□□□ 0.51
PDLIM1-201ENST00000329399 A0A0C4DFX4 3053 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 MYH9P35579 1960 aaKnown RBP18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 HBP1O60381 514 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 RFC2P35250 354 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 SLC26A2P50443 739 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 MGAT3Q09327 533 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 PPP2R5CQ13362 524 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 DPCR1Q3MIW9 517 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 C11orf57Q6ZUT1 292 aaPredicted RBP18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 SV2BQ7L1I2 683 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 C7orf25Q9BPX7 421 aa18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 MMTAG2Q9BU76 263 aaKnown RBP18.24■□□□□ 0.51
PDLIM1-201ENST00000329399 TANC1Q9C0D5 1861 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 ZBTB39O15060 712 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 PLCG1P19174 1290 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 AFMP43652 599 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 JAK3P52333 1124 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 PRKCEQ02156 737 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 NAALADL2Q58DX5 795 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 FAM26DQ5JW98 314 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 KIAA0319LQ8IZA0 1049 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 SNX29Q8TEQ0 813 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 TRIM44Q96DX7 344 aaPredicted RBP18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 CDHR5Q9HBB8 845 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 RGL1Q9NZL6 768 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 PCDHA2Q9Y5H9 948 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 EVPLQ92817 2033 aa18.23■□□□□ 0.51
PDLIM1-201ENST00000329399 C22orf31O95567 290 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 MYOGP15173 224 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 SFNP31947 248 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 RABGGTBP53611 331 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 MYL5Q02045 173 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 RPAINQ86UA6 219 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 DBF4BQ8NFT6 615 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 TCEAL9Q9UHQ7 104 aa18.22■□□□□ 0.51
PDLIM1-201ENST00000329399 A0A087WWV3 80 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 PVALEFA0A1B0GWK0 134 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 ZBBXA8MT70 800 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 BIN1O00499 593 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 OATP04181 439 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 TPM3P06753 285 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 CDC25AP30304 524 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 ZNF658Q5TYW1 1059 aaPredicted RBP18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 TAF2Q6P1X5 1199 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 ENOX1Q8TC92 643 aaKnown RBP18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms