RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 PLAGL2Q9UPG8 496 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 PCDHB4Q9Y5E5 795 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 GPR75-ASB3A0A0A6YYF3 556 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 EIF3BP55884 814 aaKnown RBP16.58■□□□□ 0.24
GCFC2-201ENST00000321027 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 SH2D3AQ9BRG2 576 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 EDEM3Q9BZQ6 932 aa16.58■□□□□ 0.24
GCFC2-201ENST00000321027 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
GCFC2-201ENST00000321027 SSU72P8A0A1W2PR75 194 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
GCFC2-201ENST00000321027 SLC8A1P32418 973 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 PIK3CAP42336 1068 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
GCFC2-201ENST00000321027 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
GCFC2-201ENST00000321027 C16orf86Q6ZW13 317 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 NLRP14Q86W24 1093 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
GCFC2-201ENST00000321027 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 TMEM206Q9H813 350 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 GMNCA6NCL1 334 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 ARHGAP42A6NI28 874 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 TMED2Q15363 201 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 HEMGNQ9BXL5 484 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 HSPA6P17066 643 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
GCFC2-201ENST00000321027 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 RHOT2Q8IXI1 618 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
GCFC2-201ENST00000321027 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 AFG3L2Q9Y4W6 797 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 SH3BP5O60239 455 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 PPP1R37O75864 691 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 FTLP02792 175 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 UCHL3P15374 230 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 SLMAPQ14BN4 828 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 LRRC8CQ8TDW0 803 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 MAD2L2Q9UI95 211 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 KCNG1Q9UIX4 513 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 RNF8O76064 485 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 PDHBP11177 359 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 SEC24CP53992 1094 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 KRT81Q14533 505 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 ZIM3Q96PE6 472 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 DNAJC7Q99615 494 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 POLLQ9UGP5 575 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 PPP4CP60510 307 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 HERVK_113P62684 666 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 DYNLT1P63172 113 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 ACTN3Q08043 901 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 FBXW10Q5XX13 1052 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 CCDC117Q8IWD4 279 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 ATP6V0A1Q93050 837 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 FAM20AQ96MK3 541 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 NUF2Q9BZD4 464 aa16.56■□□□□ 0.24
GCFC2-201ENST00000321027 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
GCFC2-201ENST00000321027 TTI1O43156 1089 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 RWDD2BP57060 319 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 PPP2R2AP63151 447 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 MIPOL1Q8TD10 442 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 GOLGA8SH3BPF8 625 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 SGK1O00141 431 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
GCFC2-201ENST00000321027 IL9RQ01113 521 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 ARMC9Q7Z3E5 817 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 PSD3Q9NYI0 1048 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 MAD1L1Q9Y6D9 718 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 SLC37A4O43826 429 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 GUCY2CP25092 1073 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
GCFC2-201ENST00000321027 EIF3HO15372 352 aaKnown RBP eCLIP16.54■□□□□ 0.24
GCFC2-201ENST00000321027 RAD51CO43502 376 aa16.54■□□□□ 0.24
GCFC2-201ENST00000321027 BAG2O95816 211 aa16.54■□□□□ 0.24
GCFC2-201ENST00000321027 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
GCFC2-201ENST00000321027 C6orf118Q5T5N4 469 aa16.54■□□□□ 0.24
GCFC2-201ENST00000321027 RNF169Q8NCN4 708 aa16.54■□□□□ 0.24
GCFC2-201ENST00000321027 PADI6Q6TGC4 694 aa16.54■□□□□ 0.24
GCFC2-201ENST00000321027 EIF2AK1Q9BQI3 630 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms