RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 SUCLA2Q9P2R7 463 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 SRPRBQ9Y5M8 271 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ROBO2Q9HCK4 1378 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ENDOD1O94919 500 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 SYF2O95926 243 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 LMNB1P20700 586 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 TMPRSS15P98073 1019 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CCDC51Q96ER9 411 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 NCAPGQ9BPX3 1015 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ZMYND12Q9H0C1 365 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 DUOX2Q9NRD8 1548 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 HMGCS2P54868 508 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 STX1BP61266 288 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 SLC9A5Q14940 896 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 R3HDM1Q15032 1099 aaKnown RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 PADI6Q6TGC4 694 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 TRIM51Q9BSJ1 452 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 USP20Q9Y2K6 914 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 COASYQ13057 564 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 CHP1Q99653 195 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 YIPF2Q9BWQ6 316 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 DBR1Q9UK59 544 aaKnown RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 PRR23AA6NEV1 266 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 HSPA4LO95757 839 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 PSAPP07602 524 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 TCN1P20061 433 aaPredicted RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 MAGOHP61326 146 aaKnown RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 CDR2Q01850 454 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 GRAPQ13588 217 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 STOX1Q6ZVD7 989 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 GRAPLQ8TC17 118 aaPredicted RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.89
SSBP2-201ENST00000320672 ISLR2Q6UXK2 745 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 RASGRP2Q7LDG7 609 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 MAP7D3Q8IWC1 876 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 BTBD6Q96KE9 485 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 CD209Q9NNX6 404 aa9.46□□□□□ -0.89
SSBP2-201ENST00000320672 ARHGEF10O15013 1369 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 SESN2P58004 480 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 FKBP3Q00688 224 aaKnown RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 TAS2R42Q7RTR8 314 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 UBA3Q8TBC4 463 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 TTC1Q99614 292 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 PCSK7Q16549 785 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 CCDC124Q96CT7 223 aaKnown RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 GSDMAQ96QA5 445 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 SLC5A4Q9NY91 659 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 RCOR1Q9UKL0 485 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 ITM2BQ9Y287 266 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF500O60304 480 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 DGKIO75912 1065 aa9.46□□□□□ -0.9
SSBP2-201ENST00000320672 GABPB1Q06547 395 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 MXD4Q14582 209 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 DHX35Q9H5Z1 703 aaKnown RBP9.46□□□□□ -0.9
SSBP2-201ENST00000320672 H3BRJ5 948 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PRPF3O43395 683 aaKnown RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 SUN1O94901 812 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 TTC4O95801 387 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 FTLP02792 175 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 SERPING1P05155 500 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 TRIM59Q8IWR1 403 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 LEMD3Q9Y2U8 911 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 NUDCD1Q96RS6 583 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 IL25Q9H293 177 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PTPRHQ9HD43 1115 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 RNF146Q9NTX7 359 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 INTS2Q9H0H0 1204 aaKnown RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PNMA6FA0A0J9YX94 578 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 C2CD2LO14523 706 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 MFAP3LO75121 409 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 NR1D1P20393 614 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 CYP2B6P20813 491 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 FBXW4P57775 412 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 APBA1Q02410 837 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 GRIN1Q05586 938 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PFDN1O60925 122 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 ETFBP38117 255 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 FAXCQ5TGI0 409 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 ANKRD40Q6AI12 368 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 DDX42Q86XP3 938 aaKnown RBP eCLIP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 CATSPER3Q86XQ3 398 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 SLC25A41Q8N5S1 370 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 NDFIP2Q9NV92 336 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 CLDN3O15551 220 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 DRAP1Q14919 205 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms